Protein–RNA interactions for Protein: P49917

LIG4, DNA ligase 4, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4P49917 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
LIG4P49917 Y_RNA.363-201ENST00000365529 113 ntBASIC1.16□□□□□ -2.22
LIG4P49917 RNU2-14P-201ENST00000411053 191 ntBASIC1.16□□□□□ -2.22
LIG4P49917 HSPE1P25-201ENST00000455484 251 ntBASIC1.16□□□□□ -2.22
LIG4P49917 RNU6-496P-201ENST00000516145 99 ntBASIC1.16□□□□□ -2.22
LIG4P49917 RNU6-191P-201ENST00000516295 94 ntBASIC1.16□□□□□ -2.22
LIG4P49917 Y_RNA.711-201ENST00000516993 102 ntBASIC1.16□□□□□ -2.22
LIG4P49917 RNU6-1209P-201ENST00000363655 107 ntBASIC1.15□□□□□ -2.23
LIG4P49917 Y_RNA.164-201ENST00000363709 102 ntBASIC1.15□□□□□ -2.23
LIG4P49917 RNU1-124P-201ENST00000363861 145 ntBASIC1.15□□□□□ -2.23
LIG4P49917 SNORD14E-201ENST00000364009 85 ntBASIC1.15□□□□□ -2.23
LIG4P49917 RNU6-969P-201ENST00000383900 105 ntBASIC1.15□□□□□ -2.23
LIG4P49917 MIR15B-201ENST00000385045 98 ntBASIC1.15□□□□□ -2.23
LIG4P49917 MIR548P-201ENST00000408336 84 ntBASIC1.15□□□□□ -2.23
LIG4P49917 SNORA36B-201ENST00000410438 131 ntBASIC1.15□□□□□ -2.23
LIG4P49917 SNORD79.1-201ENST00000516069 84 ntBASIC1.15□□□□□ -2.23
LIG4P49917 SNORA74.3-201ENST00000517108 154 ntBASIC1.15□□□□□ -2.23
LIG4P49917 AC107973.1-201ENST00000530249 576 ntTSL 4 BASIC1.15□□□□□ -2.23
LIG4P49917 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
LIG4P49917 MIR3192-201ENST00000584920 77 ntBASIC1.15□□□□□ -2.23
LIG4P49917 SNORD114-21-201ENST00000606412 72 ntBASIC1.15□□□□□ -2.23
LIG4P49917 RNU4-90P-201ENST00000362773 141 ntBASIC1.14□□□□□ -2.23
LIG4P49917 RNU6-797P-201ENST00000363101 109 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.105-201ENST00000363182 111 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.136-201ENST00000363444 102 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.796-201ENST00000364268 102 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.799-201ENST00000364992 102 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.380-201ENST00000365663 111 ntBASIC1.14□□□□□ -2.23
LIG4P49917 SNORA70.7-201ENST00000384159 133 ntBASIC1.14□□□□□ -2.23
LIG4P49917 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
LIG4P49917 SNORD12-201ENST00000391002 90 ntBASIC1.14□□□□□ -2.23
LIG4P49917 SNORA26.5-201ENST00000391215 123 ntBASIC1.14□□□□□ -2.23
LIG4P49917 AC245047.8-201ENST00000456455 284 ntBASIC1.14□□□□□ -2.23
LIG4P49917 snoU13.25-201ENST00000458945 104 ntBASIC1.14□□□□□ -2.23
LIG4P49917 RNU6-437P-201ENST00000459408 95 ntBASIC1.14□□□□□ -2.23
LIG4P49917 RPS23P4-201ENST00000487908 423 ntBASIC1.14□□□□□ -2.23
LIG4P49917 Y_RNA.676-201ENST00000516393 96 ntBASIC1.14□□□□□ -2.23
LIG4P49917 SNORA18.7-201ENST00000516910 131 ntBASIC1.14□□□□□ -2.23
LIG4P49917 AC087685.1-201ENST00000587507 141 ntBASIC1.14□□□□□ -2.23
LIG4P49917 AL391903.3-201ENST00000612158 163 ntBASIC1.14□□□□□ -2.23
LIG4P49917 AC007742.2-201ENST00000618226 398 ntBASIC1.14□□□□□ -2.23
LIG4P49917 SNORA80D-201ENST00000384488 135 ntBASIC1.13□□□□□ -2.23
LIG4P49917 Y_RNA.569-201ENST00000384749 103 ntBASIC1.13□□□□□ -2.23
LIG4P49917 Y_RNA.581-201ENST00000391017 97 ntBASIC1.13□□□□□ -2.23
LIG4P49917 AC063976.4-201ENST00000421971 163 ntBASIC1.13□□□□□ -2.23
LIG4P49917 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.13□□□□□ -2.23
LIG4P49917 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.13□□□□□ -2.23
LIG4P49917 SNORA40.15-201ENST00000516884 107 ntBASIC1.13□□□□□ -2.23
LIG4P49917 MIR2681-201ENST00000581814 105 ntBASIC1.13□□□□□ -2.23
LIG4P49917 MIR3171-201ENST00000584270 74 ntBASIC1.13□□□□□ -2.23
LIG4P49917 AC005357.1-201ENST00000588399 301 ntBASIC1.13□□□□□ -2.23
LIG4P49917 PRELID3BP2-201ENST00000605362 201 ntBASIC1.13□□□□□ -2.23
LIG4P49917 AC134026.1-201ENST00000623249 2239 ntBASIC1.13□□□□□ -2.23
LIG4P49917 Y_RNA.158-201ENST00000363651 101 ntBASIC1.12□□□□□ -2.23
LIG4P49917 RNU6-674P-201ENST00000363831 107 ntBASIC1.12□□□□□ -2.23
LIG4P49917 Y_RNA.216-201ENST00000364205 93 ntBASIC1.12□□□□□ -2.23
LIG4P49917 MIR19B1-201ENST00000384829 87 ntBASIC1.12□□□□□ -2.23
LIG4P49917 MIR520C-201ENST00000385005 87 ntBASIC1.12□□□□□ -2.23
LIG4P49917 MIR1278-201ENST00000408753 81 ntBASIC1.12□□□□□ -2.23
LIG4P49917 RNU6-121P-201ENST00000410525 99 ntBASIC1.12□□□□□ -2.23
LIG4P49917 OR2A41P-201ENST00000473586 105 ntBASIC1.12□□□□□ -2.23
LIG4P49917 NDUFA4P2-201ENST00000489989 244 ntBASIC1.12□□□□□ -2.23
LIG4P49917 RNU6-764P-201ENST00000516396 105 ntBASIC1.12□□□□□ -2.23
LIG4P49917 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.12□□□□□ -2.23
LIG4P49917 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.12□□□□□ -2.23
LIG4P49917 Y_RNA.455-201ENST00000384230 98 ntBASIC1.11□□□□□ -2.23
LIG4P49917 MIR802-201ENST00000390235 94 ntBASIC1.11□□□□□ -2.23
LIG4P49917 MTCO2P33-201ENST00000402100 465 ntBASIC1.11□□□□□ -2.23
LIG4P49917 MTCO1P5-201ENST00000433573 344 ntBASIC1.11□□□□□ -2.23
LIG4P49917 AC002429.1-201ENST00000437672 148 ntBASIC1.11□□□□□ -2.23
LIG4P49917 RPS29P28-201ENST00000446439 141 ntBASIC1.11□□□□□ -2.23
LIG4P49917 SNORD123-201ENST00000459473 70 ntBASIC1.11□□□□□ -2.23
LIG4P49917 RPS26P48-201ENST00000491713 339 ntBASIC1.11□□□□□ -2.23
LIG4P49917 MRPS35P2-201ENST00000508242 191 ntBASIC1.11□□□□□ -2.23
LIG4P49917 AC020661.2-201ENST00000560114 134 ntBASIC1.11□□□□□ -2.23
LIG4P49917 RPL23AP91-201ENST00000569211 455 ntBASIC1.11□□□□□ -2.23
LIG4P49917 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.11□□□□□ -2.23
LIG4P49917 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.1□□□□□ -2.23
LIG4P49917 SNORD114-27-201ENST00000363766 70 ntBASIC1.1□□□□□ -2.23
LIG4P49917 RNU4-38P-201ENST00000364472 129 ntBASIC1.1□□□□□ -2.23
LIG4P49917 RNU6-442P-201ENST00000383968 104 ntBASIC1.1□□□□□ -2.23
LIG4P49917 SNORD38C-201ENST00000384381 69 ntBASIC1.1□□□□□ -2.23
LIG4P49917 Y_RNA.527-201ENST00000384573 102 ntBASIC1.1□□□□□ -2.23
LIG4P49917 RNU6-763P-201ENST00000390865 106 ntBASIC1.1□□□□□ -2.23
LIG4P49917 SNORA75.2-201ENST00000391138 150 ntBASIC1.1□□□□□ -2.23
LIG4P49917 SNORA75.3-201ENST00000391231 150 ntBASIC1.1□□□□□ -2.23
LIG4P49917 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.1□□□□□ -2.23
LIG4P49917 ELOCP20-201ENST00000422460 345 ntBASIC1.1□□□□□ -2.23
LIG4P49917 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.1□□□□□ -2.23
LIG4P49917 RNU7-41P-201ENST00000515917 61 ntBASIC1.1□□□□□ -2.23
LIG4P49917 RNA5SP102-201ENST00000516865 106 ntBASIC1.1□□□□□ -2.23
LIG4P49917 AC131281.1-201ENST00000522984 164 ntBASIC1.1□□□□□ -2.23
LIG4P49917 AC113195.1-201ENST00000579952 141 ntBASIC1.1□□□□□ -2.23
LIG4P49917 MIR4764-201ENST00000580680 88 ntBASIC1.1□□□□□ -2.23
LIG4P49917 AL355297.3-201ENST00000604082 446 ntBASIC1.1□□□□□ -2.23
LIG4P49917 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.23
LIG4P49917 RNU6-770P-201ENST00000363929 105 ntBASIC1.09□□□□□ -2.23
LIG4P49917 RNU6-899P-201ENST00000363947 107 ntBASIC1.09□□□□□ -2.23
LIG4P49917 Y_RNA.214-201ENST00000364201 112 ntBASIC1.09□□□□□ -2.23
LIG4P49917 RNU6-290P-201ENST00000365212 101 ntBASIC1.09□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms