Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
NEDD4P46934 AL135790.2-201ENST00000437701 267 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AC104332.1-201ENST00000440471 797 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 RPL30P7-201ENST00000479312 323 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AC098869.1-201ENST00000481627 292 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 CYCTP-201ENST00000504253 315 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AP003733.2-201ENST00000529409 171 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AC024405.2-202ENST00000532731 184 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AC127455.1-201ENST00000565496 145 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 MIR4295-201ENST00000585286 85 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AL512605.2-201ENST00000592972 256 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AL078604.3-201ENST00000615580 211 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 AL591926.4-201ENST00000616895 298 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 MIR548AY-201ENST00000617669 107 ntBASIC1.23□□□□□ -2.21
NEDD4P46934 RNU6-694P-201ENST00000364071 147 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 RNU6-801P-201ENST00000364087 105 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 Y_RNA.253-201ENST00000364562 112 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 SNORA72.4-201ENST00000384174 132 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 RNU6-1160P-201ENST00000384546 104 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 RNU6-1109P-201ENST00000391187 107 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 MIR891A-201ENST00000401237 79 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC117454.1-201ENST00000491120 168 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 RNU6-322P-201ENST00000516010 103 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC019176.1-201ENST00000518519 225 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC090124.1-201ENST00000525097 448 ntTSL 3 BASIC1.22□□□□□ -2.21
NEDD4P46934 AC090049.2-201ENST00000550377 109 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 MIR4778-201ENST00000577635 80 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 MIR2681-201ENST00000581814 105 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC120024.3-201ENST00000603167 156 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC136443.5-201ENST00000603741 370 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AL365434.2-201ENST00000607979 234 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC007742.2-201ENST00000618226 398 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 AC022140.2-201ENST00000623500 188 ntBASIC1.22□□□□□ -2.21
NEDD4P46934 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
NEDD4P46934 Y_RNA.64-201ENST00000362845 102 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 RNU6-674P-201ENST00000363831 107 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 RNU6-899P-201ENST00000363947 107 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 Y_RNA.203-201ENST00000364106 102 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 SNORA2.2-201ENST00000365473 135 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 RNU6-163P-201ENST00000384396 106 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 MIR522-201ENST00000385071 87 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 MTCO1P5-201ENST00000433573 344 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 RNU7-141P-201ENST00000459304 62 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 AC087343.1-201ENST00000477341 475 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 Y_RNA.720-201ENST00000517166 92 ntBASIC1.21□□□□□ -2.22
NEDD4P46934 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.21□□□□□ -2.22
NEDD4P46934 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.2□□□□□ -2.22
NEDD4P46934 SNORA25.1-201ENST00000362326 128 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RNU4-38P-201ENST00000364472 129 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RNU6-806P-201ENST00000365147 105 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RNU6-144P-201ENST00000383951 107 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RNU6-514P-201ENST00000384208 107 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 Y_RNA.541-201ENST00000384640 113 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 SNORA36B-201ENST00000410438 131 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 AC113618.1-201ENST00000416747 285 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RPL21P38-201ENST00000418090 167 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 RPS27P16-201ENST00000425758 201 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 MIR3664-201ENST00000579074 99 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 MIR4719-201ENST00000585233 84 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 AC087685.1-201ENST00000587507 141 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
NEDD4P46934 Y_RNA.84-201ENST00000363011 104 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 Y_RNA.145-201ENST00000363527 102 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 SNORD114-22-201ENST00000365423 72 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 MIR606-201ENST00000384851 96 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 RNU6-131P-201ENST00000391144 107 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 SNRPGP10-201ENST00000432323 225 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 AC092991.1-201ENST00000477176 376 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC1.19□□□□□ -2.22
NEDD4P46934 AL512310.8-201ENST00000550183 120 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 AC106754.2-201ENST00000623006 233 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 U6.104-201ENST00000637979 90 ntBASIC1.19□□□□□ -2.22
NEDD4P46934 RNU6-1084P-201ENST00000362498 107 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 Y_RNA.26-201ENST00000362539 101 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RNU1-93P-201ENST00000364704 169 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 SNORA26.5-201ENST00000391215 123 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 MLLT10P1-201ENST00000418346 262 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 DYNLT3P2-201ENST00000442517 295 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RPS29P28-201ENST00000446439 141 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 AC093850.1-201ENST00000454121 251 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RNU6-437P-201ENST00000459408 95 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 AC114811.1-201ENST00000507207 168 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RNU6-1007P-201ENST00000516586 107 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 SNORA27.4-201ENST00000516650 95 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 RNU6-1116P-201ENST00000517269 99 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 JPX_2.1-201ENST00000614161 69 ntBASIC1.18□□□□□ -2.22
NEDD4P46934 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.18□□□□□ -2.22
NEDD4P46934 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
NEDD4P46934 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
NEDD4P46934 SNORA63C-201ENST00000364578 129 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 snoU2-30.1-201ENST00000365012 70 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 RNU6-713P-201ENST00000384761 107 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 MIR452-201ENST00000385020 85 ntBASIC1.17□□□□□ -2.22
NEDD4P46934 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 201.6 ms