Protein–RNA interactions for Protein: P41238

APOBEC1, C->U-editing enzyme APOBEC-1, humanhuman

Known RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1P41238 RPL23AP91-201ENST00000569211 455 ntBASIC1.48□□□□□ -2.17
APOBEC1P41238 MIR4282-201ENST00000583613 67 ntBASIC1.48□□□□□ -2.17
APOBEC1P41238 AC006006.1-201ENST00000603082 144 ntBASIC1.48□□□□□ -2.17
APOBEC1P41238 Y_RNA.802-201ENST00000614892 130 ntBASIC1.48□□□□□ -2.17
APOBEC1P41238 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.48□□□□□ -2.17
APOBEC1P41238 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC1.48□□□□□ -2.17
APOBEC1P41238 RNU6-833P-201ENST00000363486 107 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 SNORD27-201ENST00000363981 72 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 snoU2-30.1-201ENST00000365012 70 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 SNORA8.3-201ENST00000384679 139 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 MIR526A2-201ENST00000390198 65 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 RNA5SP496-201ENST00000391240 109 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 RNU6-651P-201ENST00000411040 105 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 CBX3P4-201ENST00000538909 354 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 MIR4778-201ENST00000577635 80 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.47□□□□□ -2.17
APOBEC1P41238 MIR4422-201ENST00000581938 83 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 AC087685.1-201ENST00000587507 141 ntBASIC1.47□□□□□ -2.17
APOBEC1P41238 Y_RNA.20-201ENST00000362479 113 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 SNORD1A-201ENST00000364968 72 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 RNA5SP363-201ENST00000365072 115 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 RNU6-338P-201ENST00000383888 105 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 Y_RNA.477-201ENST00000384352 108 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 MIR504-201ENST00000385065 83 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 MIR1278-201ENST00000408753 81 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 RNU6-383P-201ENST00000410864 94 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 RN7SKP101-201ENST00000411376 320 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.46□□□□□ -2.18
APOBEC1P41238 PIGPP3-201ENST00000425307 415 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 Y_RNA.638-201ENST00000459374 113 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 AC079140.2-201ENST00000506193 142 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 AC114811.1-201ENST00000507207 168 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 Y_RNA.673-201ENST00000516306 88 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 SNORD45.4-201ENST00000516629 73 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 RNU6-1116P-201ENST00000517269 99 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 MIR3128-201ENST00000581957 66 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 MIR3124-201ENST00000582636 67 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 FAS-AS1.2-201ENST00000620386 170 ntBASIC1.46□□□□□ -2.18
APOBEC1P41238 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.46□□□□□ -2.18
APOBEC1P41238 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
APOBEC1P41238 MIR302D-201ENST00000362275 68 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 RNU6-199P-201ENST00000362954 107 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 Y_RNA.242-201ENST00000364473 110 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 SNORA20.1-201ENST00000364790 130 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 Y_RNA.307-201ENST00000365022 117 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 Y_RNA.401-201ENST00000383965 117 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 Y_RNA.447-201ENST00000384184 113 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 RNU1-78P-201ENST00000391248 165 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 RN7SKP51-201ENST00000410781 304 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 CYCSP49-201ENST00000420810 319 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBEC1P41238 HMGN2P32-201ENST00000444648 269 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.45□□□□□ -2.18
APOBEC1P41238 RNU6-1023P-201ENST00000516137 106 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 RNU6-548P-201ENST00000517083 115 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC1.45□□□□□ -2.18
APOBEC1P41238 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBEC1P41238 MIR4643-201ENST00000577473 78 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 AL442067.1-201ENST00000613261 223 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 MIR7843-201ENST00000622274 79 ntBASIC1.45□□□□□ -2.18
APOBEC1P41238 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.45□□□□□ -2.18
APOBEC1P41238 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
APOBEC1P41238 AC068700.1-201ENST00000565862 3754 ntBASIC1.44□□□□□ -2.18
APOBEC1P41238 MIR802-201ENST00000390235 94 ntBASIC1.44□□□□□ -2.18
APOBEC1P41238 Y_RNA.618-201ENST00000410949 107 ntBASIC1.44□□□□□ -2.18
APOBEC1P41238 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBEC1P41238 AC093850.1-201ENST00000454121 251 ntBASIC1.44□□□□□ -2.18
APOBEC1P41238 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.44□□□□□ -2.18
APOBEC1P41238 MIR4285-201ENST00000581001 85 ntBASIC1.44□□□□□ -2.18
APOBEC1P41238 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.44□□□□□ -2.18
APOBEC1P41238 Y_RNA.65-201ENST00000362846 100 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 SNORD14E-201ENST00000364009 85 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 Y_RNA.292-201ENST00000364904 97 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 SNORD50B-201ENST00000364995 70 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 Y_RNA.304-201ENST00000365011 112 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 RNA5SP190-201ENST00000365222 118 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 Y_RNA.489-201ENST00000384410 101 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 RNU6-1065P-201ENST00000384513 106 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 MIR626-201ENST00000385032 94 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 SNX2P2-201ENST00000424553 323 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 SNORD11-201ENST00000459124 84 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 MTND1P19-201ENST00000511780 315 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.43□□□□□ -2.18
APOBEC1P41238 MIR3937-201ENST00000580135 106 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 AL365265.1-201ENST00000621045 234 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 AC106754.2-201ENST00000623006 233 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.43□□□□□ -2.18
APOBEC1P41238 AP000648.3-201ENST00000623539 4507 ntBASIC1.43□□□□□ -2.18
APOBEC1P41238 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
APOBEC1P41238 Y_RNA.24-201ENST00000362508 103 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 Y_RNA.76-201ENST00000362931 109 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 RNU6-457P-201ENST00000363999 107 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 RNU4-10P-201ENST00000364383 140 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 Y_RNA.262-201ENST00000364641 102 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 Y_RNA.336-201ENST00000365307 109 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 MIR452-201ENST00000385020 85 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 SNORD58.1-201ENST00000391313 66 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 AC027119.1-201ENST00000440877 241 ntBASIC1.42□□□□□ -2.18
APOBEC1P41238 NDUFA4P2-201ENST00000489989 244 ntBASIC1.42□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 127.2 ms