Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 MIR5692C2-201ENST00000577959 77 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 MIR3671-201ENST00000580455 88 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 MIR4524B-201ENST00000581569 115 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 AC005357.1-201ENST00000588399 301 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 AL353997.5-201ENST00000618886 171 ntBASIC1.47□□□□□ -2.17
HNF4AP41235 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
HNF4AP41235 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 RNU6-899P-201ENST00000363947 107 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 Y_RNA.267-201ENST00000364679 109 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 Y_RNA.292-201ENST00000364904 97 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 RNU6ATAC23P-201ENST00000408448 123 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 SNORA36B-201ENST00000410438 131 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.46□□□□□ -2.18
HNF4AP41235 SNX2P2-201ENST00000424553 323 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 Y_RNA.638-201ENST00000459374 113 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 AC137770.1-201ENST00000504620 530 ntTSL 3 BASIC1.46□□□□□ -2.18
HNF4AP41235 Y_RNA.679-201ENST00000516416 91 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 SNORA31.10-201ENST00000516482 106 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 RNU6-341P-201ENST00000516973 96 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 AC011604.1-201ENST00000545978 196 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 AL160236.1-201ENST00000556317 195 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.46□□□□□ -2.18
HNF4AP41235 AL929325.1-201ENST00000603096 117 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 MIR548AY-201ENST00000617669 107 ntBASIC1.46□□□□□ -2.18
HNF4AP41235 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.46□□□□□ -2.18
HNF4AP41235 RNU6-1123P-201ENST00000362347 106 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 SNORA1B-201ENST00000362535 133 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 RNY4P28-201ENST00000365281 93 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 RNU6-1080P-201ENST00000383982 107 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 SNORA72-201ENST00000384339 132 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 MIR520G-201ENST00000385064 90 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 MIR513A1-201ENST00000385138 129 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 SNORA67.6-201ENST00000391093 99 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.45□□□□□ -2.18
HNF4AP41235 AC233266.1-201ENST00000454518 96 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.45□□□□□ -2.18
HNF4AP41235 AC127455.1-201ENST00000565496 145 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 MIR4303-201ENST00000581299 66 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AL645939.4-201ENST00000604495 135 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AC242852.1-201ENST00000612151 96 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AL442067.1-201ENST00000613261 223 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AC244015.1-201ENST00000622301 99 ntBASIC1.45□□□□□ -2.18
HNF4AP41235 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.44□□□□□ -2.18
HNF4AP41235 RNU6-457P-201ENST00000363999 107 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 RNY1-201ENST00000364228 113 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 RNU4-10P-201ENST00000364383 140 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 MIR320A-201ENST00000385302 82 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 RNU6-440P-201ENST00000390882 105 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 SNORA67.5-201ENST00000391036 107 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 AC245047.3-201ENST00000429428 127 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.44□□□□□ -2.18
HNF4AP41235 RNU7-94P-201ENST00000459576 63 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 RPL23AP54-201ENST00000495129 419 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.44□□□□□ -2.18
HNF4AP41235 RNY3P16-201ENST00000516338 101 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 RNU7-116P-201ENST00000516940 62 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 AC073349.3-201ENST00000617616 186 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 MIR8054-201ENST00000620877 86 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 AL365265.1-201ENST00000621045 234 ntBASIC1.44□□□□□ -2.18
HNF4AP41235 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
HNF4AP41235 RNU6-1205P-201ENST00000363625 106 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 RNU6-60P-201ENST00000364792 103 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 Y_RNA.572-201ENST00000384757 98 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 SNORA12.1-201ENST00000390873 148 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 SNORA17.3-201ENST00000391159 129 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 MIR1278-201ENST00000408753 81 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 RNU6-383P-201ENST00000410864 94 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 AL354695.1-201ENST00000427935 228 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 RNU4-71P-201ENST00000516258 113 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 AC090425.1-201ENST00000610007 140 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 AC141273.2-201ENST00000618989 130 ntBASIC1.43□□□□□ -2.18
HNF4AP41235 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
HNF4AP41235 RNU6-653P-201ENST00000363074 106 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 Y_RNA.293-201ENST00000364908 93 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 Y_RNA.304-201ENST00000365011 112 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 Y_RNA.621-201ENST00000411065 96 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 Y_RNA.626-201ENST00000411288 95 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 Z98949.2-201ENST00000440996 144 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 AL049830.1-201ENST00000468034 425 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.42□□□□□ -2.18
HNF4AP41235 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.42□□□□□ -2.18
HNF4AP41235 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 AC130289.1-201ENST00000577321 73 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 AC009779.6-201ENST00000603972 165 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 AL365434.2-201ENST00000607979 234 ntBASIC1.42□□□□□ -2.18
HNF4AP41235 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
HNF4AP41235 Y_RNA.140-201ENST00000363474 103 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 RNU4-41P-201ENST00000364426 143 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 Y_RNA.257-201ENST00000364596 102 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 RNA5SP259-201ENST00000365541 109 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 RNU6-144P-201ENST00000383951 107 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 Y_RNA.552-201ENST00000384665 112 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 RNU11-5P-201ENST00000391216 129 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
HNF4AP41235 RNU6-437P-201ENST00000459408 95 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 AL358944.1-201ENST00000528537 144 ntBASIC1.41□□□□□ -2.18
HNF4AP41235 AP002004.2-201ENST00000531656 154 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms