Protein–RNA interactions for Protein: P40925

MDH1, Malate dehydrogenase, cytoplasmic, humanhuman

Known RBP Predictions only

Length 334 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1P40925 AP003357.1-201ENST00000604497 148 ntBASIC0.43□□□□□ -2.34
MDH1P40925 AC084782.3-201ENST00000612282 578 ntBASIC0.43□□□□□ -2.34
MDH1P40925 RNA5SP347-201ENST00000362445 119 ntBASIC0.42□□□□□ -2.34
MDH1P40925 Y_RNA.27-201ENST00000362540 103 ntBASIC0.42□□□□□ -2.34
MDH1P40925 RNA5SP499-201ENST00000363982 119 ntBASIC0.42□□□□□ -2.34
MDH1P40925 RNY3P11-201ENST00000364153 102 ntBASIC0.42□□□□□ -2.34
MDH1P40925 Y_RNA.537-201ENST00000384626 109 ntBASIC0.42□□□□□ -2.34
MDH1P40925 U8.17-201ENST00000391292 132 ntBASIC0.42□□□□□ -2.34
MDH1P40925 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.42□□□□□ -2.34
MDH1P40925 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.42□□□□□ -2.34
MDH1P40925 MIR5188-201ENST00000583467 113 ntBASIC0.42□□□□□ -2.34
MDH1P40925 MIR6734-201ENST00000621166 68 ntBASIC0.42□□□□□ -2.34
MDH1P40925 TPTEP1-208ENST00000636884 213 ntBASIC0.42□□□□□ -2.34
MDH1P40925 Y_RNA.160-201ENST00000363677 92 ntBASIC0.41□□□□□ -2.34
MDH1P40925 Y_RNA.310-201ENST00000365063 113 ntBASIC0.41□□□□□ -2.34
MDH1P40925 MIR140-201ENST00000385282 100 ntBASIC0.41□□□□□ -2.34
MDH1P40925 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.41□□□□□ -2.34
MDH1P40925 AC092628.1-201ENST00000436250 252 ntBASIC0.41□□□□□ -2.34
MDH1P40925 Y_RNA.653-201ENST00000459091 95 ntBASIC0.41□□□□□ -2.34
MDH1P40925 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.41□□□□□ -2.34
MDH1P40925 RNU6-229P-201ENST00000516614 102 ntBASIC0.41□□□□□ -2.34
MDH1P40925 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.41□□□□□ -2.34
MDH1P40925 AC024405.2-202ENST00000532731 184 ntBASIC0.41□□□□□ -2.34
MDH1P40925 AP000753.3-201ENST00000604083 169 ntBASIC0.41□□□□□ -2.34
MDH1P40925 AC025253.1-201ENST00000613623 543 ntBASIC0.41□□□□□ -2.34
MDH1P40925 U6.92-201ENST00000636464 89 ntBASIC0.41□□□□□ -2.34
MDH1P40925 Y_RNA.116-201ENST00000363292 103 ntBASIC0.4□□□□□ -2.35
MDH1P40925 SNORD18A-201ENST00000363753 72 ntBASIC0.4□□□□□ -2.35
MDH1P40925 RNY1P14-201ENST00000384426 108 ntBASIC0.4□□□□□ -2.35
MDH1P40925 Y_RNA.570-201ENST00000384750 101 ntBASIC0.4□□□□□ -2.35
MDH1P40925 RNU6-177P-201ENST00000411257 104 ntBASIC0.4□□□□□ -2.35
MDH1P40925 RNU4-57P-201ENST00000515980 135 ntBASIC0.4□□□□□ -2.35
MDH1P40925 RNU6-966P-201ENST00000516479 104 ntBASIC0.4□□□□□ -2.35
MDH1P40925 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.4□□□□□ -2.35
MDH1P40925 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.4□□□□□ -2.35
MDH1P40925 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
MDH1P40925 MIR377-201ENST00000362145 69 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU6-490P-201ENST00000362985 107 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU6-1209P-201ENST00000363655 107 ntBASIC0.39□□□□□ -2.35
MDH1P40925 Y_RNA.279-201ENST00000364763 95 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU4-45P-201ENST00000365469 141 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU6-42P-201ENST00000384165 107 ntBASIC0.39□□□□□ -2.35
MDH1P40925 MIR570-201ENST00000384917 97 ntBASIC0.39□□□□□ -2.35
MDH1P40925 MIR573-201ENST00000384964 99 ntBASIC0.39□□□□□ -2.35
MDH1P40925 MT-TN-201ENST00000387400 73 ntBASIC0.39□□□□□ -2.35
MDH1P40925 MTCO2P27-201ENST00000420740 428 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC114737.2-201ENST00000421583 173 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC244023.1-201ENST00000426884 112 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC098934.3-201ENST00000430450 190 ntBASIC0.39□□□□□ -2.35
MDH1P40925 Y_RNA.655-201ENST00000515919 96 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU7-115P-201ENST00000516433 55 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC127455.1-201ENST00000565496 145 ntBASIC0.39□□□□□ -2.35
MDH1P40925 SNORA4-201ENST00000584302 138 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AL512605.2-201ENST00000592972 256 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC242498.1-201ENST00000604134 111 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC093783.1-201ENST00000612976 329 ntBASIC0.39□□□□□ -2.35
MDH1P40925 AC243994.1-201ENST00000618627 109 ntBASIC0.39□□□□□ -2.35
MDH1P40925 RNU6-268P-201ENST00000364174 107 ntBASIC0.38□□□□□ -2.35
MDH1P40925 RNU1-133P-201ENST00000364867 167 ntBASIC0.38□□□□□ -2.35
MDH1P40925 Y_RNA.331-201ENST00000365267 102 ntBASIC0.38□□□□□ -2.35
MDH1P40925 MTCO2P33-201ENST00000402100 465 ntBASIC0.38□□□□□ -2.35
MDH1P40925 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.38□□□□□ -2.35
MDH1P40925 HMGN1P10-201ENST00000474557 553 ntBASIC0.38□□□□□ -2.35
MDH1P40925 RNU6-977P-201ENST00000516411 103 ntBASIC0.38□□□□□ -2.35
MDH1P40925 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.38□□□□□ -2.35
MDH1P40925 VN1R91P-201ENST00000594377 169 ntBASIC0.38□□□□□ -2.35
MDH1P40925 AL080274.1-201ENST00000605565 220 ntBASIC0.38□□□□□ -2.35
MDH1P40925 MIR548AY-201ENST00000617669 107 ntBASIC0.38□□□□□ -2.35
MDH1P40925 AC015726.2-201ENST00000620112 122 ntBASIC0.38□□□□□ -2.35
MDH1P40925 MIR6513-201ENST00000621188 64 ntBASIC0.38□□□□□ -2.35
MDH1P40925 Y_RNA.796-201ENST00000364268 102 ntBASIC0.37□□□□□ -2.35
MDH1P40925 Y_RNA.799-201ENST00000364992 102 ntBASIC0.37□□□□□ -2.35
MDH1P40925 MIR520F-201ENST00000384824 87 ntBASIC0.37□□□□□ -2.35
MDH1P40925 Y_RNA.599-201ENST00000410489 109 ntBASIC0.37□□□□□ -2.35
MDH1P40925 RNU6-847P-201ENST00000411115 108 ntBASIC0.37□□□□□ -2.35
MDH1P40925 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC0.37□□□□□ -2.35
MDH1P40925 MIR4791-201ENST00000607666 84 ntBASIC0.37□□□□□ -2.35
MDH1P40925 RMST_2.1-201ENST00000617263 136 ntBASIC0.37□□□□□ -2.35
MDH1P40925 RNU4-40P-201ENST00000364351 143 ntBASIC0.36□□□□□ -2.35
MDH1P40925 Y_RNA.462-201ENST00000384268 102 ntBASIC0.36□□□□□ -2.35
MDH1P40925 RNU6-342P-201ENST00000384521 104 ntBASIC0.36□□□□□ -2.35
MDH1P40925 MIR520H-201ENST00000385126 88 ntBASIC0.36□□□□□ -2.35
MDH1P40925 MIR518E-201ENST00000385252 88 ntBASIC0.36□□□□□ -2.35
MDH1P40925 AL590004.1-201ENST00000405321 300 ntBASIC0.36□□□□□ -2.35
MDH1P40925 SNRPGP14-201ENST00000435400 219 ntBASIC0.36□□□□□ -2.35
MDH1P40925 FGF7P6-202ENST00000451282 293 ntBASIC0.36□□□□□ -2.35
MDH1P40925 AC091951.2-201ENST00000500762 203 ntBASIC0.36□□□□□ -2.35
MDH1P40925 RNU6-559P-201ENST00000516151 98 ntBASIC0.36□□□□□ -2.35
MDH1P40925 RNU7-181P-201ENST00000517234 74 ntBASIC0.36□□□□□ -2.35
MDH1P40925 MIR548AO-201ENST00000579992 96 ntBASIC0.36□□□□□ -2.35
MDH1P40925 AC008507.4-201ENST00000585464 127 ntBASIC0.36□□□□□ -2.35
MDH1P40925 AC113139.1-201ENST00000605049 239 ntBASIC0.36□□□□□ -2.35
MDH1P40925 Y_RNA.772-201ENST00000606692 102 ntBASIC0.36□□□□□ -2.35
MDH1P40925 MTND1P7-201ENST00000632801 297 ntBASIC0.36□□□□□ -2.35
MDH1P40925 MIR5087-201ENST00000635826 76 ntBASIC0.36□□□□□ -2.35
MDH1P40925 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
MDH1P40925 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.36□□□□□ -2.35
MDH1P40925 U8.7-201ENST00000364940 136 ntBASIC0.35□□□□□ -2.35
MDH1P40925 RNU6-934P-201ENST00000365154 107 ntBASIC0.35□□□□□ -2.35
MDH1P40925 RNY1P8-201ENST00000383970 114 ntBASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms