Protein–RNA interactions for Protein: P31269

HOXA9, Homeobox protein Hox-A9, humanhuman

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9P31269 MIR4714-201ENST00000580728 77 ntBASIC0.84□□□□□ -2.27
HOXA9P31269 AC027279.3-201ENST00000625055 122 ntBASIC0.84□□□□□ -2.27
HOXA9P31269 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.84□□□□□ -2.28
HOXA9P31269 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.84□□□□□ -2.28
HOXA9P31269 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC0.84□□□□□ -2.28
HOXA9P31269 Y_RNA.36-201ENST00000362602 112 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 Y_RNA.148-201ENST00000363557 117 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 SNORD114-2-201ENST00000363953 78 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 RNU4-50P-201ENST00000364361 141 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 U8.7-201ENST00000364940 136 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 Y_RNA.363-201ENST00000365529 113 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 Y_RNA.393-201ENST00000383936 102 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 RNU6-1323P-201ENST00000384025 107 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 Y_RNA.431-201ENST00000384086 102 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 SNORA72-201ENST00000384339 132 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 RNU6-163P-201ENST00000384396 106 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 AL451046.2-201ENST00000403074 277 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 MIR1298-201ENST00000408783 112 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 RNU6-710P-201ENST00000410424 105 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 AC022028.1-201ENST00000412054 408 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 AL390729.2-201ENST00000416137 156 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 CYCTP-201ENST00000504253 315 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC0.83□□□□□ -2.28
HOXA9P31269 AC090971.5-201ENST00000621102 293 ntBASIC0.83□□□□□ -2.28
HOXA9P31269 Y_RNA.138-201ENST00000363462 102 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 RNU6-801P-201ENST00000364087 105 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 RNU1-36P-201ENST00000365130 165 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 Y_RNA.383-201ENST00000383855 97 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 Y_RNA.445-201ENST00000384168 102 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 Y_RNA.456-201ENST00000384232 111 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 Y_RNA.526-201ENST00000384572 110 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 RNU6-1105P-201ENST00000384774 107 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 RNU6ATAC8P-201ENST00000408460 126 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 MLLT10P1-201ENST00000418346 262 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 SNORA31.2-201ENST00000516019 134 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 RNU6-947P-201ENST00000516264 106 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 AC022616.4-201ENST00000522985 181 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 POLR3GP1-201ENST00000594073 261 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 AL160413.1-201ENST00000622780 310 ntBASIC0.82□□□□□ -2.28
HOXA9P31269 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.82□□□□□ -2.28
HOXA9P31269 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC0.81□□□□□ -2.28
HOXA9P31269 Y_RNA.28-201ENST00000362554 111 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 Y_RNA.61-201ENST00000362835 102 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU6-450P-201ENST00000364654 107 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 SNORD50B-201ENST00000364995 70 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 Y_RNA.424-201ENST00000384063 103 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 Y_RNA.535-201ENST00000384612 99 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU6-823P-201ENST00000391042 103 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU2-14P-201ENST00000411053 191 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 SNRPGP10-201ENST00000432323 225 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC245047.7-201ENST00000440265 293 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC117454.1-201ENST00000491120 168 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU6-322P-201ENST00000516010 103 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU6-397P-201ENST00000516226 104 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RNU7-115P-201ENST00000516433 55 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 SNORD45.4-201ENST00000516629 73 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC024405.2-202ENST00000532731 184 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC133485.1-201ENST00000567176 124 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC138907.6-201ENST00000568401 126 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.81□□□□□ -2.28
HOXA9P31269 MIR3192-201ENST00000584920 77 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AC124312.5-201ENST00000604451 268 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 RAC1P9-201ENST00000604990 392 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 AL096861.1-201ENST00000610899 123 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.81□□□□□ -2.28
HOXA9P31269 MIR6779-201ENST00000617283 64 ntBASIC0.81□□□□□ -2.28
HOXA9P31269 IST1-227ENST00000626438 126 ntTSL 5 BASIC0.81□□□□□ -2.28
HOXA9P31269 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC0.8□□□□□ -2.28
HOXA9P31269 Y_RNA.105-201ENST00000363182 111 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-1048P-201ENST00000364054 107 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 Y_RNA.222-201ENST00000364264 102 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 Y_RNA.336-201ENST00000365307 109 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 AC117470.1-201ENST00000381974 330 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-102P-201ENST00000384485 104 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-21P-201ENST00000384710 107 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-910P-201ENST00000390844 107 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU2-64P-201ENST00000411315 191 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-1132P-201ENST00000459214 107 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RPS26P48-201ENST00000491713 339 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 SEPT14P8-201ENST00000508026 178 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 ACA64.5-201ENST00000516207 127 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 Y_RNA.713-201ENST00000517013 96 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 Y_RNA.715-201ENST00000517082 110 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU6-897P-201ENST00000517135 105 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 MIR4300-201ENST00000581016 96 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RN7SL793P-201ENST00000583259 296 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 AP003357.1-201ENST00000604497 148 ntBASIC0.8□□□□□ -2.28
HOXA9P31269 RNU4-80P-201ENST00000363200 141 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 SNORD113-8-201ENST00000363497 74 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 SNORA22B-201ENST00000383876 138 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 Y_RNA.418-201ENST00000384029 102 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 MIR516B2-201ENST00000385190 85 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 SNORD115-46-201ENST00000390982 71 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 RNU6-121P-201ENST00000410525 99 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 HSPE1P25-201ENST00000455484 251 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 Y_RNA.631-201ENST00000459607 101 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 SNORA70.22-201ENST00000517160 124 ntBASIC0.79□□□□□ -2.28
HOXA9P31269 AC090142.3-201ENST00000519012 385 ntBASIC0.79□□□□□ -2.28
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms