Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 RNU6-597P-201ENST00000365620 102 ntBASIC2.17□□□□□ -2.06
CD40P25942 SNORD61-201ENST00000384252 73 ntBASIC2.17□□□□□ -2.06
CD40P25942 RNU6-301P-201ENST00000384277 107 ntBASIC2.17□□□□□ -2.06
CD40P25942 TRAJ2-201ENST00000390535 66 ntAPPRIS P1 BASIC2.17□□□□□ -2.06
CD40P25942 RNU6-588P-201ENST00000410281 105 ntBASIC2.17□□□□□ -2.06
CD40P25942 RNA5SP508-201ENST00000411327 119 ntBASIC2.17□□□□□ -2.06
CD40P25942 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC2.17□□□□□ -2.06
CD40P25942 HMGN2P32-201ENST00000444648 269 ntBASIC2.17□□□□□ -2.06
CD40P25942 RNU7-12P-201ENST00000516030 62 ntBASIC2.17□□□□□ -2.06
CD40P25942 SNORA25.12-201ENST00000516202 82 ntBASIC2.17□□□□□ -2.06
CD40P25942 AC112693.2-201ENST00000556538 232 ntBASIC2.17□□□□□ -2.06
CD40P25942 MIR3646-201ENST00000578301 84 ntBASIC2.17□□□□□ -2.06
CD40P25942 MIR4446-201ENST00000578505 67 ntBASIC2.17□□□□□ -2.06
CD40P25942 MIR5092-201ENST00000583139 88 ntBASIC2.17□□□□□ -2.06
CD40P25942 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CD40P25942 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CD40P25942 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC2.16□□□□□ -2.06
CD40P25942 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CD40P25942 RNU6-268P-201ENST00000364174 107 ntBASIC2.16□□□□□ -2.06
CD40P25942 SNORA25.7-201ENST00000364375 127 ntBASIC2.16□□□□□ -2.06
CD40P25942 SNORA67.4-201ENST00000384688 142 ntBASIC2.16□□□□□ -2.06
CD40P25942 SNORA75.5-201ENST00000391291 81 ntBASIC2.16□□□□□ -2.06
CD40P25942 MIR513C-201ENST00000401352 84 ntBASIC2.16□□□□□ -2.06
CD40P25942 RPL30P13-201ENST00000418873 348 ntBASIC2.16□□□□□ -2.06
CD40P25942 SNRPGP13-201ENST00000442212 177 ntBASIC2.16□□□□□ -2.06
CD40P25942 AL392103.1-201ENST00000447000 198 ntBASIC2.16□□□□□ -2.06
CD40P25942 RNU6-693P-201ENST00000516134 107 ntBASIC2.16□□□□□ -2.06
CD40P25942 AC007751.1-201ENST00000529260 376 ntBASIC2.16□□□□□ -2.06
CD40P25942 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.16□□□□□ -2.06
CD40P25942 MIR548X2-201ENST00000579776 100 ntBASIC2.16□□□□□ -2.06
CD40P25942 AC027279.3-201ENST00000625055 122 ntBASIC2.16□□□□□ -2.06
CD40P25942 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.15□□□□□ -2.06
CD40P25942 RNU6-1082P-201ENST00000364574 107 ntBASIC2.15□□□□□ -2.07
CD40P25942 Y_RNA.343-201ENST00000365354 112 ntBASIC2.15□□□□□ -2.07
CD40P25942 SNORD24-201ENST00000383884 75 ntBASIC2.15□□□□□ -2.07
CD40P25942 RNU6-360P-201ENST00000390944 104 ntBASIC2.15□□□□□ -2.07
CD40P25942 RNA5SP212-201ENST00000391223 107 ntBASIC2.15□□□□□ -2.07
CD40P25942 MIR891A-201ENST00000401237 79 ntBASIC2.15□□□□□ -2.07
CD40P25942 MIR548O-201ENST00000408583 114 ntBASIC2.15□□□□□ -2.07
CD40P25942 RNA5SP272-201ENST00000516095 111 ntBASIC2.15□□□□□ -2.07
CD40P25942 RNU6-426P-201ENST00000516464 97 ntBASIC2.15□□□□□ -2.07
CD40P25942 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.15□□□□□ -2.07
CD40P25942 AC006441.5-201ENST00000612680 209 ntBASIC2.15□□□□□ -2.07
CD40P25942 AC131280.1-202ENST00000624067 4211 ntBASIC2.15□□□□□ -2.07
CD40P25942 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.14□□□□□ -2.07
CD40P25942 RNU6-888P-201ENST00000363010 101 ntBASIC2.14□□□□□ -2.07
CD40P25942 RNU6-833P-201ENST00000363486 107 ntBASIC2.14□□□□□ -2.07
CD40P25942 RNA5SP456-201ENST00000364002 114 ntBASIC2.14□□□□□ -2.07
CD40P25942 SNORA1-201ENST00000384107 130 ntBASIC2.14□□□□□ -2.07
CD40P25942 MIR548A2-201ENST00000384956 97 ntBASIC2.14□□□□□ -2.07
CD40P25942 MIR569-201ENST00000385228 96 ntBASIC2.14□□□□□ -2.07
CD40P25942 MIR613-201ENST00000385248 95 ntBASIC2.14□□□□□ -2.07
CD40P25942 AL359511.1-201ENST00000402970 211 ntBASIC2.14□□□□□ -2.07
CD40P25942 SNRPGP14-201ENST00000435400 219 ntBASIC2.14□□□□□ -2.07
CD40P25942 PGBD4P5-201ENST00000445958 426 ntBASIC2.14□□□□□ -2.07
CD40P25942 AC093850.1-201ENST00000454121 251 ntBASIC2.14□□□□□ -2.07
CD40P25942 RNU6-826P-201ENST00000516827 104 ntBASIC2.14□□□□□ -2.07
CD40P25942 MIR4298-201ENST00000584380 73 ntBASIC2.14□□□□□ -2.07
CD40P25942 AL773524.1-201ENST00000614065 229 ntBASIC2.14□□□□□ -2.07
CD40P25942 AL513423.1-201ENST00000621695 132 ntBASIC2.14□□□□□ -2.07
CD40P25942 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
CD40P25942 SNORA6-201ENST00000384033 151 ntBASIC2.13□□□□□ -2.07
CD40P25942 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.13□□□□□ -2.07
CD40P25942 AC244636.1-201ENST00000421152 228 ntBASIC2.13□□□□□ -2.07
CD40P25942 RN7SL429P-201ENST00000479090 223 ntBASIC2.13□□□□□ -2.07
CD40P25942 RN7SL489P-201ENST00000486185 223 ntBASIC2.13□□□□□ -2.07
CD40P25942 RN7SL327P-201ENST00000488659 223 ntBASIC2.13□□□□□ -2.07
CD40P25942 AC008413.1-201ENST00000511864 177 ntBASIC2.13□□□□□ -2.07
CD40P25942 RNU7-25P-201ENST00000516544 62 ntBASIC2.13□□□□□ -2.07
CD40P25942 AC090142.3-201ENST00000519012 385 ntBASIC2.13□□□□□ -2.07
CD40P25942 MIR4778-201ENST00000577635 80 ntBASIC2.13□□□□□ -2.07
CD40P25942 MIR3129-201ENST00000581095 76 ntBASIC2.13□□□□□ -2.07
CD40P25942 RN7SL853P-201ENST00000617250 223 ntBASIC2.13□□□□□ -2.07
CD40P25942 AL590808.1-201ENST00000618696 141 ntBASIC2.13□□□□□ -2.07
CD40P25942 AC015726.2-201ENST00000620112 122 ntBASIC2.13□□□□□ -2.07
CD40P25942 SNORD3E-202ENST00000627253 216 ntBASIC2.13□□□□□ -2.07
CD40P25942 FO624990.1-201ENST00000636373 85 ntBASIC2.13□□□□□ -2.07
CD40P25942 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.13□□□□□ -2.07
CD40P25942 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
CD40P25942 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CD40P25942 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.13□□□□□ -2.07
CD40P25942 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.13□□□□□ -2.07
CD40P25942 AC008555.8-201ENST00000623602 2168 ntBASIC2.12□□□□□ -2.07
CD40P25942 RNY1P11-201ENST00000363759 113 ntBASIC2.12□□□□□ -2.07
CD40P25942 RNU6-704P-201ENST00000364162 103 ntBASIC2.12□□□□□ -2.07
CD40P25942 RNU6-439P-201ENST00000384188 106 ntBASIC2.12□□□□□ -2.07
CD40P25942 Y_RNA.497-201ENST00000384447 98 ntBASIC2.12□□□□□ -2.07
CD40P25942 SNORA20-201ENST00000384662 132 ntBASIC2.12□□□□□ -2.07
CD40P25942 MIR518F-201ENST00000384973 87 ntBASIC2.12□□□□□ -2.07
CD40P25942 MIR660-201ENST00000385235 97 ntBASIC2.12□□□□□ -2.07
CD40P25942 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.12□□□□□ -2.07
CD40P25942 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
CD40P25942 RNU6-203P-201ENST00000384038 104 ntBASIC2.11□□□□□ -2.07
CD40P25942 RNU1-138P-201ENST00000384093 164 ntBASIC2.11□□□□□ -2.07
CD40P25942 SNORD38C-201ENST00000384381 69 ntBASIC2.11□□□□□ -2.07
CD40P25942 Y_RNA.568-201ENST00000384742 113 ntBASIC2.11□□□□□ -2.07
CD40P25942 RNU7-197P-201ENST00000458836 62 ntBASIC2.11□□□□□ -2.07
CD40P25942 AC092991.1-201ENST00000477176 376 ntBASIC2.11□□□□□ -2.07
CD40P25942 AC234781.5-201ENST00000508429 271 ntBASIC2.11□□□□□ -2.07
CD40P25942 SNORA18.4-201ENST00000516440 124 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 166.8 ms