Protein–RNA interactions for Protein: P23560

BDNF, Brain-derived neurotrophic factor, humanhuman

Predictions only

Length 247 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BDNFP23560 MIR151B-201ENST00000584249 96 ntBASIC0.86□□□□□ -2.27
BDNFP23560 AC104695.3-201ENST00000604052 296 ntBASIC0.86□□□□□ -2.27
BDNFP23560 AC122108.2-201ENST00000611946 526 ntBASIC0.86□□□□□ -2.27
BDNFP23560 MTND4LP32-201ENST00000636111 270 ntBASIC0.86□□□□□ -2.27
BDNFP23560 MIR1302-1-201ENST00000637932 143 ntBASIC0.86□□□□□ -2.27
BDNFP23560 AC134026.1-201ENST00000623249 2239 ntBASIC0.85□□□□□ -2.27
BDNFP23560 Y_RNA.187-201ENST00000363918 113 ntBASIC0.85□□□□□ -2.27
BDNFP23560 SNORD114-2-201ENST00000363953 78 ntBASIC0.85□□□□□ -2.27
BDNFP23560 SNORA1.2-201ENST00000365189 134 ntBASIC0.85□□□□□ -2.27
BDNFP23560 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.85□□□□□ -2.27
BDNFP23560 RPS26P5-201ENST00000418544 335 ntBASIC0.85□□□□□ -2.27
BDNFP23560 AC096644.2-201ENST00000429278 159 ntBASIC0.85□□□□□ -2.27
BDNFP23560 AL035398.1-201ENST00000430869 322 ntBASIC0.85□□□□□ -2.27
BDNFP23560 RNU6-830P-201ENST00000516353 107 ntBASIC0.85□□□□□ -2.27
BDNFP23560 Y_RNA.718-201ENST00000517110 102 ntBASIC0.85□□□□□ -2.27
BDNFP23560 DEFB108E-201ENST00000524692 240 ntBASIC0.85□□□□□ -2.27
BDNFP23560 AC024405.2-202ENST00000532731 184 ntBASIC0.85□□□□□ -2.27
BDNFP23560 UBE2V2P2-201ENST00000587677 504 ntBASIC0.85□□□□□ -2.27
BDNFP23560 Pinc.1-201ENST00000616452 154 ntBASIC0.85□□□□□ -2.27
BDNFP23560 RMST_2.1-201ENST00000617263 136 ntBASIC0.85□□□□□ -2.27
BDNFP23560 MIR548AY-201ENST00000617669 107 ntBASIC0.85□□□□□ -2.27
BDNFP23560 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.85□□□□□ -2.27
BDNFP23560 MIR6734-201ENST00000621166 68 ntBASIC0.85□□□□□ -2.27
BDNFP23560 7SK.10-201ENST00000621414 298 ntBASIC0.85□□□□□ -2.27
BDNFP23560 AC236972.2-201ENST00000434979 310 ntBASIC0.84□□□□□ -2.27
BDNFP23560 COX6CP6-201ENST00000490840 228 ntBASIC0.84□□□□□ -2.27
BDNFP23560 RNU7-115P-201ENST00000516433 55 ntBASIC0.84□□□□□ -2.27
BDNFP23560 SNORA40.14-201ENST00000516543 86 ntBASIC0.84□□□□□ -2.27
BDNFP23560 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.84□□□□□ -2.27
BDNFP23560 RNU1-115P-201ENST00000365329 160 ntBASIC0.83□□□□□ -2.28
BDNFP23560 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
BDNFP23560 Y_RNA.439-201ENST00000384119 94 ntBASIC0.83□□□□□ -2.28
BDNFP23560 Y_RNA.463-201ENST00000384271 102 ntBASIC0.83□□□□□ -2.28
BDNFP23560 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.83□□□□□ -2.28
BDNFP23560 RNU6-351P-201ENST00000516097 100 ntBASIC0.83□□□□□ -2.28
BDNFP23560 Z83818.1-201ENST00000603584 150 ntBASIC0.83□□□□□ -2.28
BDNFP23560 AC084781.2-201ENST00000615568 161 ntBASIC0.83□□□□□ -2.28
BDNFP23560 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
BDNFP23560 AL442644.1-201ENST00000454390 3105 ntBASIC0.82□□□□□ -2.28
BDNFP23560 Y_RNA.148-201ENST00000363557 117 ntBASIC0.82□□□□□ -2.28
BDNFP23560 RNU6-396P-201ENST00000365369 105 ntBASIC0.82□□□□□ -2.28
BDNFP23560 RNU6-708P-201ENST00000384217 107 ntBASIC0.82□□□□□ -2.28
BDNFP23560 SNORD63-201ENST00000384262 68 ntBASIC0.82□□□□□ -2.28
BDNFP23560 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.82□□□□□ -2.28
BDNFP23560 AC004941.2-201ENST00000427009 228 ntBASIC0.82□□□□□ -2.28
BDNFP23560 AC091951.2-201ENST00000500762 203 ntBASIC0.82□□□□□ -2.28
BDNFP23560 RNU6-1223P-201ENST00000517124 104 ntBASIC0.82□□□□□ -2.28
BDNFP23560 AC036111.3-201ENST00000526389 112 ntBASIC0.82□□□□□ -2.28
BDNFP23560 AC108706.1-201ENST00000611053 297 ntBASIC0.82□□□□□ -2.28
BDNFP23560 MIR605-201ENST00000385078 83 ntBASIC0.81□□□□□ -2.28
BDNFP23560 SNORD99-201ENST00000408612 74 ntBASIC0.81□□□□□ -2.28
BDNFP23560 AL160004.2-201ENST00000432935 350 ntBASIC0.81□□□□□ -2.28
BDNFP23560 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.81□□□□□ -2.28
BDNFP23560 AL392103.1-201ENST00000447000 198 ntBASIC0.81□□□□□ -2.28
BDNFP23560 AC023449.1-201ENST00000454464 154 ntBASIC0.81□□□□□ -2.28
BDNFP23560 U8.20-201ENST00000459445 131 ntBASIC0.81□□□□□ -2.28
BDNFP23560 AC117454.1-201ENST00000491120 168 ntBASIC0.81□□□□□ -2.28
BDNFP23560 RNA5SP121-201ENST00000516537 101 ntBASIC0.81□□□□□ -2.28
BDNFP23560 DEFB117-201ENST00000602356 141 ntBASIC0.81□□□□□ -2.28
BDNFP23560 SNORD116-29-201ENST00000384516 83 ntBASIC0.8□□□□□ -2.28
BDNFP23560 MIR489-201ENST00000384923 84 ntBASIC0.8□□□□□ -2.28
BDNFP23560 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.8□□□□□ -2.28
BDNFP23560 RNU6-613P-201ENST00000410412 108 ntBASIC0.8□□□□□ -2.28
BDNFP23560 RNU7-152P-201ENST00000458982 64 ntBASIC0.8□□□□□ -2.28
BDNFP23560 HMGN1P10-201ENST00000474557 553 ntBASIC0.8□□□□□ -2.28
BDNFP23560 AC098869.1-201ENST00000481627 292 ntBASIC0.8□□□□□ -2.28
BDNFP23560 RNU6-277P-201ENST00000516272 106 ntBASIC0.8□□□□□ -2.28
BDNFP23560 RNU6-966P-201ENST00000516479 104 ntBASIC0.8□□□□□ -2.28
BDNFP23560 MIR6866-201ENST00000638146 69 ntBASIC0.8□□□□□ -2.28
BDNFP23560 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.8□□□□□ -2.28
BDNFP23560 ZNF654-201ENST00000309495 4957 ntAPPRIS P2 TSL 1 (best) BASIC0.8□□□□□ -2.28
BDNFP23560 MIR1-1-201ENST00000362147 71 ntBASIC0.79□□□□□ -2.28
BDNFP23560 RNU6-1209P-201ENST00000363655 107 ntBASIC0.79□□□□□ -2.28
BDNFP23560 RNU4-50P-201ENST00000364361 141 ntBASIC0.79□□□□□ -2.28
BDNFP23560 RNY3-201ENST00000365484 102 ntBASIC0.79□□□□□ -2.28
BDNFP23560 Y_RNA.376-201ENST00000365638 108 ntBASIC0.79□□□□□ -2.28
BDNFP23560 SNORA51.10-201ENST00000384418 136 ntBASIC0.79□□□□□ -2.28
BDNFP23560 SNORA2B-201ENST00000384583 137 ntBASIC0.79□□□□□ -2.28
BDNFP23560 Y_RNA.537-201ENST00000384626 109 ntBASIC0.79□□□□□ -2.28
BDNFP23560 Y_RNA.551-201ENST00000384661 102 ntBASIC0.79□□□□□ -2.28
BDNFP23560 RNU6-437P-201ENST00000459408 95 ntBASIC0.79□□□□□ -2.28
BDNFP23560 RNU6-976P-201ENST00000516086 111 ntBASIC0.79□□□□□ -2.28
BDNFP23560 AL355375.2-201ENST00000574825 175 ntBASIC0.79□□□□□ -2.28
BDNFP23560 MIR548AR-201ENST00000582191 57 ntBASIC0.79□□□□□ -2.28
BDNFP23560 AC092447.9-201ENST00000603395 144 ntBASIC0.79□□□□□ -2.28
BDNFP23560 AC013244.2-201ENST00000603396 103 ntBASIC0.79□□□□□ -2.28
BDNFP23560 AC022709.1-201ENST00000615967 87 ntBASIC0.79□□□□□ -2.28
BDNFP23560 MIR6835-201ENST00000621552 64 ntBASIC0.79□□□□□ -2.28
BDNFP23560 U8.17-201ENST00000391292 132 ntBASIC0.78□□□□□ -2.28
BDNFP23560 AL590004.1-201ENST00000405321 300 ntBASIC0.78□□□□□ -2.28
BDNFP23560 RNU6-733P-201ENST00000410759 104 ntBASIC0.78□□□□□ -2.28
BDNFP23560 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.78□□□□□ -2.28
BDNFP23560 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.78□□□□□ -2.28
BDNFP23560 Y_RNA.661-201ENST00000516003 99 ntBASIC0.78□□□□□ -2.28
BDNFP23560 MIR4300-201ENST00000581016 96 ntBASIC0.78□□□□□ -2.28
BDNFP23560 RNU6-94P-201ENST00000607728 107 ntBASIC0.78□□□□□ -2.28
BDNFP23560 AL132765.2-201ENST00000610812 351 ntBASIC0.78□□□□□ -2.28
BDNFP23560 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.78□□□□□ -2.28
BDNFP23560 AL606534.2-204ENST00000635008 178 ntBASIC0.78□□□□□ -2.28
BDNFP23560 RNU6-674P-201ENST00000363831 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms