Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 Y_RNA.456-201ENST00000384232 111 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 RNU6-733P-201ENST00000410759 104 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 MTCO2P27-201ENST00000420740 428 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 RPL23AP54-201ENST00000495129 419 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.61□□□□□ -2.31
HLA-DPA1P20036 AC087685.1-201ENST00000587507 141 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 AC012433.1-201ENST00000588916 398 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 AL355073.2-201ENST00000612106 557 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 AC091925.1-201ENST00000623204 462 ntBASIC0.61□□□□□ -2.31
HLA-DPA1P20036 RNU1-133P-201ENST00000364867 167 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.474-201ENST00000384341 102 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 SNORD105-201ENST00000386910 85 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 MIR1827-201ENST00000408549 66 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AC024067.1-201ENST00000426199 223 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AC024405.2-202ENST00000532731 184 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AC004817.2-201ENST00000561794 651 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AC006600.1-201ENST00000572529 153 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 VN1R91P-201ENST00000594377 169 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 AP003357.1-201ENST00000604497 148 ntBASIC0.6□□□□□ -2.31
HLA-DPA1P20036 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC0.6□□□□□ -2.31
HLA-DPA1P20036 MIR1-1-201ENST00000362147 71 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.331-201ENST00000365267 102 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 Y_RNA.370-201ENST00000365589 108 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 MIR559-201ENST00000385188 96 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 AL590004.1-201ENST00000405321 300 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 RNA5SP95-201ENST00000410319 137 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 RNU6-613P-201ENST00000410412 108 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 AC244098.3-201ENST00000424803 96 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 MIR2115-201ENST00000516657 100 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 RNU6-699P-201ENST00000517081 110 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 AC018659.1-201ENST00000551083 169 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 Pinc.1-201ENST00000616452 154 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 MIR6515-201ENST00000619843 57 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 AC139792.2-201ENST00000624218 587 ntBASIC0.59□□□□□ -2.31
HLA-DPA1P20036 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.59□□□□□ -2.32
HLA-DPA1P20036 AL442644.1-201ENST00000454390 3105 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.248-201ENST00000364501 109 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 MIR570-201ENST00000384917 97 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 RNA5SP222-201ENST00000411039 105 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.58□□□□□ -2.32
HLA-DPA1P20036 AC091951.2-201ENST00000500762 203 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 AL355375.2-201ENST00000574825 175 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 DEFB117-201ENST00000602356 141 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 Z83818.1-201ENST00000603584 150 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 AC092794.1-201ENST00000612734 582 ntBASIC0.58□□□□□ -2.32
HLA-DPA1P20036 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU6-1209P-201ENST00000363655 107 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.259-201ENST00000364619 101 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 U8.7-201ENST00000364940 136 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU6-396P-201ENST00000365369 105 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU6-945P-201ENST00000383947 107 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 U8.17-201ENST00000391292 132 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU6-1132P-201ENST00000459214 107 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU6-830P-201ENST00000516353 107 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNU7-115P-201ENST00000516433 55 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 MIR4423-201ENST00000580922 80 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 AC104695.3-201ENST00000604052 296 ntBASIC0.57□□□□□ -2.32
HLA-DPA1P20036 RNA5SP347-201ENST00000362445 119 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 RNY1-201ENST00000364228 113 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 SNORA36.2-201ENST00000384004 127 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.56□□□□□ -2.32
HLA-DPA1P20036 AC127455.1-201ENST00000565496 145 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 MIR5188-201ENST00000583467 113 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 uc_338.17-201ENST00000619633 179 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 MTND4LP32-201ENST00000636111 270 ntBASIC0.56□□□□□ -2.32
HLA-DPA1P20036 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.55□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.168-201ENST00000363740 102 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 RNU6-268P-201ENST00000364174 107 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.428-201ENST00000384078 102 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.462-201ENST00000384268 102 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 SNORA51.10-201ENST00000384418 136 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 MIR489-201ENST00000384923 84 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 AF228730.4-201ENST00000421457 183 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 SNRPGP14-201ENST00000435400 219 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 NDUFA4P2-201ENST00000489989 244 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.55□□□□□ -2.32
HLA-DPA1P20036 MIR2681-201ENST00000581814 105 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.772-201ENST00000606692 102 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 AC010205.1-201ENST00000616668 449 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 MIR548AY-201ENST00000617669 107 ntBASIC0.55□□□□□ -2.32
HLA-DPA1P20036 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.54□□□□□ -2.32
HLA-DPA1P20036 SNORD81.1-201ENST00000363064 77 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0.54□□□□□ -2.32
HLA-DPA1P20036 HMGN1P10-201ENST00000474557 553 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 RNA5SP436-201ENST00000516020 115 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 RNU7-110P-201ENST00000516891 62 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 AP003484.1-201ENST00000530974 250 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 AC011373.1-201ENST00000607270 237 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 MIR6513-201ENST00000621188 64 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 AC068700.1-201ENST00000565862 3754 ntBASIC0.54□□□□□ -2.32
HLA-DPA1P20036 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC0.53□□□□□ -2.32
HLA-DPA1P20036 Y_RNA.387-201ENST00000383918 102 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 RNU6-1040P-201ENST00000383974 107 ntBASIC0.53□□□□□ -2.32
HLA-DPA1P20036 RNU6-1237P-201ENST00000384777 107 ntBASIC0.53□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms