Protein–RNA interactions for Protein: P18848

ATF4, Cyclic AMP-dependent transcription factor ATF-4, humanhuman

Predicted RBP Predictions only

Length 351 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF4P18848 DEFB122-202ENST00000569013 197 ntBASIC2.36□□□□□ -2.03
ATF4P18848 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.36□□□□□ -2.03
ATF4P18848 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ATF4P18848 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATF4P18848 RNU6-1292P-201ENST00000383856 107 ntBASIC2.35□□□□□ -2.03
ATF4P18848 Y_RNA.410-201ENST00000383992 113 ntBASIC2.35□□□□□ -2.03
ATF4P18848 MIR518F-201ENST00000384973 87 ntBASIC2.35□□□□□ -2.03
ATF4P18848 MIR613-201ENST00000385248 95 ntBASIC2.35□□□□□ -2.03
ATF4P18848 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC2.35□□□□□ -2.03
ATF4P18848 RN7SL863P-201ENST00000462370 296 ntBASIC2.35□□□□□ -2.03
ATF4P18848 RN7SL504P-201ENST00000494496 287 ntBASIC2.35□□□□□ -2.03
ATF4P18848 RNU6-830P-201ENST00000516353 107 ntBASIC2.35□□□□□ -2.03
ATF4P18848 AC121758.2-201ENST00000553271 193 ntBASIC2.35□□□□□ -2.03
ATF4P18848 MIR5694-201ENST00000581190 76 ntBASIC2.35□□□□□ -2.03
ATF4P18848 MIR6840-201ENST00000611937 71 ntBASIC2.35□□□□□ -2.03
ATF4P18848 SCARNA15.3-201ENST00000626315 122 ntBASIC2.35□□□□□ -2.03
ATF4P18848 SCARNA4.1-201ENST00000628597 123 ntBASIC2.35□□□□□ -2.03
ATF4P18848 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATF4P18848 RNU6-1082P-201ENST00000364574 107 ntBASIC2.34□□□□□ -2.03
ATF4P18848 RNU6-439P-201ENST00000384188 106 ntBASIC2.34□□□□□ -2.03
ATF4P18848 SNORA7.4-201ENST00000384249 137 ntBASIC2.34□□□□□ -2.03
ATF4P18848 MIR194-1-201ENST00000384892 85 ntBASIC2.34□□□□□ -2.03
ATF4P18848 MIR548A2-201ENST00000384956 97 ntBASIC2.34□□□□□ -2.03
ATF4P18848 MIR624-201ENST00000385217 97 ntBASIC2.34□□□□□ -2.03
ATF4P18848 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
ATF4P18848 AL445646.1-201ENST00000431784 216 ntBASIC2.34□□□□□ -2.03
ATF4P18848 AC087499.4-201ENST00000448505 178 ntBASIC2.34□□□□□ -2.03
ATF4P18848 RPS27P21-201ENST00000486977 252 ntBASIC2.34□□□□□ -2.03
ATF4P18848 SNORA25.12-201ENST00000516202 82 ntBASIC2.34□□□□□ -2.03
ATF4P18848 SUMO2P16-201ENST00000519475 264 ntBASIC2.34□□□□□ -2.03
ATF4P18848 AP001485.1-201ENST00000604799 199 ntBASIC2.34□□□□□ -2.03
ATF4P18848 RNA5SP374-201ENST00000362939 125 ntBASIC2.33□□□□□ -2.04
ATF4P18848 SNORA1-201ENST00000384107 130 ntBASIC2.33□□□□□ -2.04
ATF4P18848 RNU6-187P-201ENST00000384139 106 ntBASIC2.33□□□□□ -2.04
ATF4P18848 MIR516B2-201ENST00000385190 85 ntBASIC2.33□□□□□ -2.04
ATF4P18848 SNORA48.2-201ENST00000390926 124 ntBASIC2.33□□□□□ -2.04
ATF4P18848 Y_RNA.584-201ENST00000391090 114 ntBASIC2.33□□□□□ -2.04
ATF4P18848 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.33□□□□□ -2.04
ATF4P18848 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC2.33□□□□□ -2.04
ATF4P18848 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.32□□□□□ -2.04
ATF4P18848 AL596028.1-201ENST00000326971 197 ntBASIC2.32□□□□□ -2.04
ATF4P18848 MIR422A-201ENST00000362286 90 ntBASIC2.32□□□□□ -2.04
ATF4P18848 SNORD50.2-201ENST00000365465 70 ntBASIC2.32□□□□□ -2.04
ATF4P18848 RNA5SP259-201ENST00000365541 109 ntBASIC2.32□□□□□ -2.04
ATF4P18848 MIR513A1-201ENST00000385138 129 ntBASIC2.32□□□□□ -2.04
ATF4P18848 RNU4-61P-201ENST00000411243 107 ntBASIC2.32□□□□□ -2.04
ATF4P18848 SNORA9.3-201ENST00000516383 129 ntBASIC2.32□□□□□ -2.04
ATF4P18848 MIR4513-201ENST00000581077 86 ntBASIC2.32□□□□□ -2.04
ATF4P18848 AC131055.1-201ENST00000584626 316 ntBASIC2.32□□□□□ -2.04
ATF4P18848 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC2.32□□□□□ -2.04
ATF4P18848 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATF4P18848 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATF4P18848 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
ATF4P18848 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
ATF4P18848 Y_RNA.37-201ENST00000362606 108 ntBASIC2.31□□□□□ -2.04
ATF4P18848 RNU1-35P-201ENST00000362782 153 ntBASIC2.31□□□□□ -2.04
ATF4P18848 SNORD18B-201ENST00000365659 72 ntBASIC2.31□□□□□ -2.04
ATF4P18848 RNU6-1189P-201ENST00000383958 107 ntBASIC2.31□□□□□ -2.04
ATF4P18848 Y_RNA.497-201ENST00000384447 98 ntBASIC2.31□□□□□ -2.04
ATF4P18848 MIR128-1-201ENST00000384921 82 ntBASIC2.31□□□□□ -2.04
ATF4P18848 AL356379.1-201ENST00000414105 126 ntBASIC2.31□□□□□ -2.04
ATF4P18848 CYCSP49-201ENST00000420810 319 ntBASIC2.31□□□□□ -2.04
ATF4P18848 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC2.31□□□□□ -2.04
ATF4P18848 AF228730.3-201ENST00000436691 102 ntBASIC2.31□□□□□ -2.04
ATF4P18848 AL135938.1-201ENST00000443141 297 ntBASIC2.31□□□□□ -2.04
ATF4P18848 RNA5SP356-201ENST00000515972 94 ntBASIC2.31□□□□□ -2.04
ATF4P18848 RNU6-322P-201ENST00000516010 103 ntBASIC2.31□□□□□ -2.04
ATF4P18848 AC095038.3-201ENST00000634439 195 ntBASIC2.31□□□□□ -2.04
ATF4P18848 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
ATF4P18848 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
ATF4P18848 RNU6-457P-201ENST00000363999 107 ntBASIC2.3□□□□□ -2.04
ATF4P18848 SNORA1.2-201ENST00000365189 134 ntBASIC2.3□□□□□ -2.04
ATF4P18848 SNORA2.2-201ENST00000365473 135 ntBASIC2.3□□□□□ -2.04
ATF4P18848 RNU6-1336P-201ENST00000383886 109 ntBASIC2.3□□□□□ -2.04
ATF4P18848 MIR569-201ENST00000385228 96 ntBASIC2.3□□□□□ -2.04
ATF4P18848 RNA5SP210-201ENST00000391034 120 ntBASIC2.3□□□□□ -2.04
ATF4P18848 AL161935.2-201ENST00000414627 60 ntBASIC2.3□□□□□ -2.04
ATF4P18848 HMGN2P19-201ENST00000425149 265 ntBASIC2.3□□□□□ -2.04
ATF4P18848 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.3□□□□□ -2.04
ATF4P18848 UBL5P2-201ENST00000583788 219 ntBASIC2.3□□□□□ -2.04
ATF4P18848 FAM106DP-201ENST00000586416 501 ntBASIC2.3□□□□□ -2.04
ATF4P18848 AC106754.2-201ENST00000623006 233 ntBASIC2.3□□□□□ -2.04
ATF4P18848 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.3□□□□□ -2.04
ATF4P18848 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
ATF4P18848 MIR22-201ENST00000362190 85 ntBASIC2.29□□□□□ -2.04
ATF4P18848 RNU6-704P-201ENST00000364162 103 ntBASIC2.29□□□□□ -2.04
ATF4P18848 Y_RNA.568-201ENST00000384742 113 ntBASIC2.29□□□□□ -2.04
ATF4P18848 MIR30A-201ENST00000385092 71 ntBASIC2.29□□□□□ -2.04
ATF4P18848 SNORD77.3-201ENST00000391113 65 ntBASIC2.29□□□□□ -2.04
ATF4P18848 AC107297.1-201ENST00000459991 176 ntBASIC2.29□□□□□ -2.04
ATF4P18848 RNA5SP341-201ENST00000516261 117 ntBASIC2.29□□□□□ -2.04
ATF4P18848 RNU6-426P-201ENST00000516464 97 ntBASIC2.29□□□□□ -2.04
ATF4P18848 AP003484.1-201ENST00000530974 250 ntBASIC2.29□□□□□ -2.04
ATF4P18848 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.29□□□□□ -2.04
ATF4P18848 AC005336.3-201ENST00000623833 2679 ntBASIC2.29□□□□□ -2.04
ATF4P18848 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.28□□□□□ -2.04
ATF4P18848 RNU6-851P-201ENST00000384565 107 ntBASIC2.28□□□□□ -2.04
ATF4P18848 U8.17-201ENST00000391292 132 ntBASIC2.28□□□□□ -2.04
ATF4P18848 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC2.28□□□□□ -2.04
ATF4P18848 TMSB4XP3-201ENST00000445144 114 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 151.7 ms