Protein–RNA interactions for Protein: P17096

HMGA1, High mobility group protein HMG-I/HMG-Y, humanhuman

Known RBP Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P17096 SNORD38C-201ENST00000384381 69 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 MIR522-201ENST00000385071 87 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 AC022784.5-201ENST00000522241 437 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 YWHAEP3-201ENST00000582767 121 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 RMST_3.1-201ENST00000611651 109 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 MIR6502-201ENST00000617296 76 ntBASIC-1.97□□□□□ -2.72
HMGA1P17096 MIR335-201ENST00000362173 94 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 RNU6-1036P-201ENST00000383959 104 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 RNU6-900P-201ENST00000384498 102 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 MTND4P18-201ENST00000447010 465 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 MTCO2P6-201ENST00000463134 685 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 AC104576.1-201ENST00000524225 88 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 MTND3P13-201ENST00000574391 343 ntBASIC-1.98□□□□□ -2.73
HMGA1P17096 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-1.98□□□□□ -2.73
HMGA1P17096 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 SNORA1.2-201ENST00000365189 134 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 MIR496-201ENST00000385226 102 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 RNU6-847P-201ENST00000411115 108 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 AC016907.1-201ENST00000419483 435 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 USP9YP12-201ENST00000450481 570 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 AP002371.2-201ENST00000624450 503 ntBASIC-1.99□□□□□ -2.73
HMGA1P17096 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC-2□□□□□ -2.73
HMGA1P17096 Y_RNA.430-201ENST00000384081 110 ntBASIC-2□□□□□ -2.73
HMGA1P17096 RNU6-1194P-201ENST00000516208 104 ntBASIC-2□□□□□ -2.73
HMGA1P17096 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-2□□□□□ -2.73
HMGA1P17096 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-2□□□□□ -2.73
HMGA1P17096 AL356055.1-201ENST00000602528 446 ntBASIC-2□□□□□ -2.73
HMGA1P17096 MIR16-2-201ENST00000362117 81 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 AL606845.1-201ENST00000404881 255 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 AL008987.1-201ENST00000415528 237 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 RNU6-175P-201ENST00000516896 107 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 RNU7-161P-201ENST00000517289 62 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 AC092574.1-201ENST00000609771 420 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 AC068137.4-201ENST00000638485 296 ntBASIC-2.01□□□□□ -2.73
HMGA1P17096 Y_RNA.184-201ENST00000363884 108 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 SNORD12C-201ENST00000386307 89 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 MIR1284-201ENST00000408337 120 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 MTND4LP7-201ENST00000431728 294 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 AL137792.2-201ENST00000443484 235 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 Y_RNA.637-201ENST00000459424 114 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 SERF1AP1-201ENST00000514575 187 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 OSBPL9P5-201ENST00000542581 171 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 AC123904.2-201ENST00000548059 300 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 AC127459.3-201ENST00000624328 466 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 AC019226.2-201ENST00000625973 424 ntBASIC-2.02□□□□□ -2.73
HMGA1P17096 Y_RNA.253-201ENST00000364562 112 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 RNU6-865P-201ENST00000364772 107 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 Y_RNA.588-201ENST00000391254 102 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 AC022028.1-201ENST00000412054 408 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 AC073464.1-201ENST00000429823 534 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 RNU6-412P-201ENST00000516434 106 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 AC024405.2-202ENST00000532731 184 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 AC011373.1-201ENST00000607270 237 ntBASIC-2.03□□□□□ -2.73
HMGA1P17096 SRP54-214ENST00000630962 162 ntTSL 5 BASIC-2.03□□□□□ -2.73
HMGA1P17096 RNU6-245P-201ENST00000384020 107 ntBASIC-2.04□□□□□ -2.74
HMGA1P17096 RNU6-118P-201ENST00000516552 102 ntBASIC-2.04□□□□□ -2.74
HMGA1P17096 SNORA27.1-201ENST00000362604 124 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 Y_RNA.38-201ENST00000362617 102 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 RNU6-509P-201ENST00000363519 107 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 Y_RNA.192-201ENST00000363977 102 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MIR539-201ENST00000365690 78 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MIR181B2-201ENST00000385004 89 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 RNU6-131P-201ENST00000391144 107 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MIR450B-201ENST00000401182 78 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MIR548H1-201ENST00000408610 102 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 RNU6-830P-201ENST00000516353 107 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 RNU6-107P-201ENST00000516643 102 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 RNU6-759P-201ENST00000516740 103 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 AC091144.1-201ENST00000519573 138 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 AC131281.1-201ENST00000522984 164 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MIR5704-201ENST00000584029 77 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-2.05□□□□□ -2.74
HMGA1P17096 Z97988.1-201ENST00000637697 135 ntBASIC-2.05□□□□□ -2.74
HMGA1P17096 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-2.06□□□□□ -2.74
HMGA1P17096 Y_RNA.22-201ENST00000362492 102 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 SNORD14E-201ENST00000364009 85 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 SNORD114-29-201ENST00000364819 70 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 RNU6-117P-201ENST00000365415 107 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 AL354751.2-201ENST00000415471 210 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 MTATP6P18-201ENST00000417994 673 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 CEP57L1P1-201ENST00000430943 1201 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 Y_RNA.679-201ENST00000516416 91 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 AC100767.1-201ENST00000528178 123 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-2.06□□□□□ -2.74
HMGA1P17096 MIR3684-201ENST00000579779 74 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 MIR4491-201ENST00000581087 68 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 AL512506.1-201ENST00000613918 449 ntBASIC-2.06□□□□□ -2.74
HMGA1P17096 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-2.07□□□□□ -2.74
HMGA1P17096 RNU6-1233P-201ENST00000362922 102 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 Y_RNA.117-201ENST00000363294 101 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 Y_RNA.151-201ENST00000363566 112 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 RNU6-312P-201ENST00000364629 107 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 Y_RNA.559-201ENST00000384686 107 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC-2.07□□□□□ -2.74
HMGA1P17096 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-2.07□□□□□ -2.74
HMGA1P17096 SNORA25.14-201ENST00000516481 132 ntBASIC-2.07□□□□□ -2.74
HMGA1P17096 BNIP3P39-201ENST00000601077 554 ntBASIC-2.07□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 106.3 ms