Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 MTND4LP32-201ENST00000636111 270 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 AC134026.1-201ENST00000623249 2239 ntBASIC0.57□□□□□ -2.32
CAPN1P07384 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CAPN1P07384 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC0.56□□□□□ -2.32
CAPN1P07384 Y_RNA.36-201ENST00000362602 112 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 RNU6-654P-201ENST00000364373 107 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 RNU6-1175P-201ENST00000365200 107 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 Y_RNA.368-201ENST00000365547 113 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 MIR216A-201ENST00000385063 110 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 SNORD28B-201ENST00000390993 75 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 AL590004.1-201ENST00000405321 300 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 SNORD111-201ENST00000408139 94 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 MTCO2P27-201ENST00000420740 428 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 AC092628.1-201ENST00000436250 252 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 RNU11-2P-201ENST00000516898 142 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 RNU6-699P-201ENST00000517081 110 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 MIR4423-201ENST00000580922 80 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 MIR6779-201ENST00000617283 64 ntBASIC0.56□□□□□ -2.32
CAPN1P07384 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.56□□□□□ -2.32
CAPN1P07384 RNA5SP347-201ENST00000362445 119 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 Y_RNA.310-201ENST00000365063 113 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 RNU6-1323P-201ENST00000384025 107 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 SNORD116-29-201ENST00000384516 83 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 RNU6-1067P-201ENST00000384752 107 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 Y_RNA.619-201ENST00000410951 90 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AC099799.1-201ENST00000439809 192 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AL392103.1-201ENST00000447000 198 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.55□□□□□ -2.32
CAPN1P07384 RNU4-54P-201ENST00000516428 129 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 MIR4711-201ENST00000578274 70 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AC005730.3-201ENST00000583067 366 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AC133104.2-201ENST00000615272 193 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 AC008133.2-201ENST00000624540 351 ntBASIC0.55□□□□□ -2.32
CAPN1P07384 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
CAPN1P07384 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.55□□□□□ -2.32
CAPN1P07384 RNU6-490P-201ENST00000362985 107 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 AC098934.3-201ENST00000430450 190 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 AC005534.2-201ENST00000431047 433 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 AC005042.3-201ENST00000453230 174 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.54□□□□□ -2.32
CAPN1P07384 AC091951.2-201ENST00000500762 203 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 AC006600.1-201ENST00000572529 153 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 MIR548AR-201ENST00000582191 57 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 DEFB117-201ENST00000602356 141 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.54□□□□□ -2.32
CAPN1P07384 MIR6516-201ENST00000630554 81 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 MIR4251-201ENST00000635819 61 ntBASIC0.54□□□□□ -2.32
CAPN1P07384 SNORD81.1-201ENST00000363064 77 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 SNORD14E-201ENST00000364009 85 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 Y_RNA.203-201ENST00000364106 102 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 Y_RNA.341-201ENST00000365341 102 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 RNU6-1040P-201ENST00000383974 107 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 Y_RNA.505-201ENST00000384489 102 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 RNU6-710P-201ENST00000410424 105 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AF228730.4-201ENST00000421457 183 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.53□□□□□ -2.32
CAPN1P07384 AC098869.1-201ENST00000481627 292 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.53□□□□□ -2.32
CAPN1P07384 RNU6-277P-201ENST00000516272 106 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AC024405.2-202ENST00000532731 184 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AC018659.1-201ENST00000551083 169 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 MIR4300-201ENST00000581016 96 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 POLR3GP1-201ENST00000594073 261 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 VN1R91P-201ENST00000594377 169 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AL355073.2-201ENST00000612106 557 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 AC007742.2-201ENST00000618226 398 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 MIR4272-201ENST00000635924 64 ntBASIC0.53□□□□□ -2.32
CAPN1P07384 Y_RNA.259-201ENST00000364619 101 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 SNORD113.3-201ENST00000364630 78 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 RNY1P4-201ENST00000384595 115 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 MIR570-201ENST00000384917 97 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 RNY4P36-201ENST00000391116 96 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 RNA5SP95-201ENST00000410319 137 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 SNRPGP14-201ENST00000435400 219 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 SNORA20.3-201ENST00000516880 132 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 RNU7-116P-201ENST00000516940 62 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 AP003357.1-201ENST00000604497 148 ntBASIC0.52□□□□□ -2.33
CAPN1P07384 U8.7-201ENST00000364940 136 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 Y_RNA.331-201ENST00000365267 102 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
CAPN1P07384 Y_RNA.456-201ENST00000384232 111 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 MIR802-201ENST00000390235 94 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AC098614.3-201ENST00000438957 440 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AL157398.1-201ENST00000452981 186 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 NDUFA4P2-201ENST00000489989 244 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AC127455.1-201ENST00000565496 145 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AC011195.1-201ENST00000578177 177 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AC025253.1-201ENST00000613623 543 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 AC010205.1-201ENST00000616668 449 ntBASIC0.51□□□□□ -2.33
CAPN1P07384 MIR1-1-201ENST00000362147 71 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 RNU6-1209P-201ENST00000363655 107 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 Y_RNA.205-201ENST00000364128 113 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 Y_RNA.387-201ENST00000383918 102 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 Y_RNA.463-201ENST00000384271 102 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 RNU1-119P-201ENST00000391122 165 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 RNA5SP222-201ENST00000411039 105 ntBASIC0.5□□□□□ -2.33
CAPN1P07384 AC138393.2-201ENST00000414742 246 ntBASIC0.5□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms