Protein–RNA interactions for Protein: P07197

NEFM, Neurofilament medium polypeptide, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEFMP07197 RNU6-743P-201ENST00000364151 106 ntBASIC3.08□□□□□ -1.92
NEFMP07197 Y_RNA.346-201ENST00000365385 112 ntBASIC3.08□□□□□ -1.92
NEFMP07197 SNORA6-201ENST00000384033 151 ntBASIC3.08□□□□□ -1.92
NEFMP07197 Y_RNA.486-201ENST00000384398 107 ntBASIC3.08□□□□□ -1.92
NEFMP07197 MIR891A-201ENST00000401237 79 ntBASIC3.08□□□□□ -1.92
NEFMP07197 RPS15AP28-201ENST00000435088 386 ntBASIC3.08□□□□□ -1.92
NEFMP07197 RNA5SP281-201ENST00000516504 135 ntBASIC3.08□□□□□ -1.92
NEFMP07197 RNU6-504P-201ENST00000516568 104 ntBASIC3.08□□□□□ -1.92
NEFMP07197 MIR3613-201ENST00000579844 87 ntBASIC3.08□□□□□ -1.92
NEFMP07197 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
NEFMP07197 Y_RNA.66-201ENST00000362862 102 ntBASIC3.07□□□□□ -1.92
NEFMP07197 RNU1-96P-201ENST00000364163 162 ntBASIC3.07□□□□□ -1.92
NEFMP07197 Y_RNA.242-201ENST00000364473 110 ntBASIC3.07□□□□□ -1.92
NEFMP07197 SNORD116-21-201ENST00000384507 92 ntBASIC3.07□□□□□ -1.92
NEFMP07197 Y_RNA.621-201ENST00000411065 96 ntBASIC3.07□□□□□ -1.92
NEFMP07197 Y_RNA.630-201ENST00000411370 108 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC3.07□□□□□ -1.92
NEFMP07197 AC018634.1-201ENST00000437554 401 ntBASIC3.07□□□□□ -1.92
NEFMP07197 HMGN2P34-201ENST00000437647 269 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AC023141.11-201ENST00000508864 202 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AC007751.1-201ENST00000529260 376 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AC091544.4-201ENST00000555268 342 ntBASIC3.07□□□□□ -1.92
NEFMP07197 MIR4679-2-201ENST00000578358 77 ntBASIC3.07□□□□□ -1.92
NEFMP07197 MIR5007-201ENST00000583098 95 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AC007229.1-201ENST00000590455 412 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AC073413.2-201ENST00000604332 360 ntBASIC3.07□□□□□ -1.92
NEFMP07197 AL121890.5-201ENST00000620848 304 ntBASIC3.07□□□□□ -1.92
NEFMP07197 Y_RNA.43-201ENST00000362670 111 ntBASIC3.06□□□□□ -1.92
NEFMP07197 RNU6-309P-201ENST00000364573 106 ntBASIC3.06□□□□□ -1.92
NEFMP07197 RNU1-51P-201ENST00000365345 176 ntBASIC3.06□□□□□ -1.92
NEFMP07197 RNU2-63P-201ENST00000410792 194 ntBASIC3.06□□□□□ -1.92
NEFMP07197 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC3.06□□□□□ -1.92
NEFMP07197 HMGN1P7-201ENST00000491722 313 ntBASIC3.06□□□□□ -1.92
NEFMP07197 RNU6-991P-201ENST00000516168 107 ntBASIC3.06□□□□□ -1.92
NEFMP07197 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC3.06□□□□□ -1.92
NEFMP07197 MTND5P32-201ENST00000560711 1802 ntBASIC3.05□□□□□ -1.92
NEFMP07197 AC131280.1-202ENST00000624067 4211 ntBASIC3.05□□□□□ -1.92
NEFMP07197 RNU6-1298P-201ENST00000362456 101 ntBASIC3.05□□□□□ -1.92
NEFMP07197 snoU2-30.2-201ENST00000362805 70 ntBASIC3.05□□□□□ -1.92
NEFMP07197 RNU1-23P-201ENST00000363361 144 ntBASIC3.05□□□□□ -1.92
NEFMP07197 RNA5SP425-201ENST00000410336 112 ntBASIC3.05□□□□□ -1.92
NEFMP07197 AL356320.1-201ENST00000429616 163 ntBASIC3.05□□□□□ -1.92
NEFMP07197 AF228730.3-201ENST00000436691 102 ntBASIC3.05□□□□□ -1.92
NEFMP07197 TRBV12-1-201ENST00000479785 344 ntBASIC3.05□□□□□ -1.92
NEFMP07197 RN7SKP19-201ENST00000516016 252 ntBASIC3.05□□□□□ -1.92
NEFMP07197 RNU7-99P-201ENST00000516271 62 ntBASIC3.05□□□□□ -1.92
NEFMP07197 AL022345.2-201ENST00000606307 135 ntBASIC3.05□□□□□ -1.92
NEFMP07197 MIR6873-201ENST00000622788 63 ntBASIC3.05□□□□□ -1.92
NEFMP07197 UGP2-230ENST00000626380 276 ntTSL 5 BASIC3.05□□□□□ -1.92
NEFMP07197 ZNF720P1-201ENST00000562403 1939 ntBASIC3.05□□□□□ -1.92
NEFMP07197 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEFMP07197 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEFMP07197 MIR21-201ENST00000362134 72 ntBASIC3.04□□□□□ -1.92
NEFMP07197 RNU6-1292P-201ENST00000383856 107 ntBASIC3.04□□□□□ -1.92
NEFMP07197 RNU6-880P-201ENST00000384526 107 ntBASIC3.04□□□□□ -1.92
NEFMP07197 MIRLET7F2-201ENST00000385277 83 ntBASIC3.04□□□□□ -1.92
NEFMP07197 RNU6-1186P-201ENST00000410429 97 ntBASIC3.04□□□□□ -1.92
NEFMP07197 AC060773.1-201ENST00000421698 310 ntBASIC3.04□□□□□ -1.92
NEFMP07197 RNA5SP170-201ENST00000517150 101 ntBASIC3.04□□□□□ -1.92
NEFMP07197 SNORD14A-201ENST00000606526 91 ntBASIC3.04□□□□□ -1.92
NEFMP07197 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
NEFMP07197 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
NEFMP07197 AC018630.2-201ENST00000534866 2403 ntBASIC3.03□□□□□ -1.92
NEFMP07197 MIR340-201ENST00000362125 95 ntBASIC3.03□□□□□ -1.92
NEFMP07197 Y_RNA.309-201ENST00000365046 111 ntBASIC3.03□□□□□ -1.92
NEFMP07197 SNORD24-201ENST00000383884 75 ntBASIC3.03□□□□□ -1.92
NEFMP07197 RNU6-147P-201ENST00000383983 107 ntBASIC3.03□□□□□ -1.92
NEFMP07197 NDUFA4P2-201ENST00000489989 244 ntBASIC3.03□□□□□ -1.92
NEFMP07197 MRPS17P9-201ENST00000511924 393 ntBASIC3.03□□□□□ -1.92
NEFMP07197 AC011406.1-201ENST00000512440 370 ntBASIC3.03□□□□□ -1.92
NEFMP07197 RNU6-781P-201ENST00000516377 101 ntBASIC3.03□□□□□ -1.92
NEFMP07197 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC3.03□□□□□ -1.92
NEFMP07197 AL358944.1-201ENST00000528537 144 ntBASIC3.03□□□□□ -1.92
NEFMP07197 AC087685.1-201ENST00000587507 141 ntBASIC3.03□□□□□ -1.92
NEFMP07197 MIR6840-201ENST00000611937 71 ntBASIC3.03□□□□□ -1.92
NEFMP07197 AC025166.1-201ENST00000612411 163 ntBASIC3.03□□□□□ -1.92
NEFMP07197 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC3.03□□□□□ -1.92
NEFMP07197 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
NEFMP07197 AL596028.1-201ENST00000326971 197 ntBASIC3.02□□□□□ -1.93
NEFMP07197 Y_RNA.35-201ENST00000362601 101 ntBASIC3.02□□□□□ -1.93
NEFMP07197 SNORA3A-201ENST00000364113 130 ntBASIC3.02□□□□□ -1.93
NEFMP07197 SNRPGP10-201ENST00000432323 225 ntBASIC3.02□□□□□ -1.93
NEFMP07197 AL353689.1-201ENST00000438895 199 ntBASIC3.02□□□□□ -1.93
NEFMP07197 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC3.02□□□□□ -1.93
NEFMP07197 Y_RNA.651-201ENST00000459380 103 ntBASIC3.02□□□□□ -1.93
NEFMP07197 Y_RNA.714-201ENST00000517065 90 ntBASIC3.02□□□□□ -1.93
NEFMP07197 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.02□□□□□ -1.93
NEFMP07197 AL359075.3-201ENST00000613288 217 ntBASIC3.02□□□□□ -1.93
NEFMP07197 MIR6766-201ENST00000622641 72 ntBASIC3.02□□□□□ -1.93
NEFMP07197 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
NEFMP07197 ZNF658B-202ENST00000615961 3375 ntBASIC3.01□□□□□ -1.93
NEFMP07197 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC3.01□□□□□ -1.93
NEFMP07197 RNU6-888P-201ENST00000363010 101 ntBASIC3.01□□□□□ -1.93
NEFMP07197 Y_RNA.253-201ENST00000364562 112 ntBASIC3.01□□□□□ -1.93
NEFMP07197 MIR561-201ENST00000385216 97 ntBASIC3.01□□□□□ -1.93
NEFMP07197 RNU2-48P-201ENST00000410694 191 ntBASIC3.01□□□□□ -1.93
NEFMP07197 AL021397.1-201ENST00000451806 248 ntBASIC3.01□□□□□ -1.93
NEFMP07197 Y_RNA.649-201ENST00000459077 103 ntBASIC3.01□□□□□ -1.93
NEFMP07197 MIR3129-201ENST00000581095 76 ntBASIC3.01□□□□□ -1.93
NEFMP07197 AL355297.2-201ENST00000604792 129 ntBASIC3.01□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms