Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 AC090517.2-201ENST00000614966 680 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 AL391262.2-201ENST00000622466 494 ntBASIC-0.25□□□□□ -2.45
HLA-DQB2P05538 SNORA72.1-201ENST00000363485 129 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 MIR1257-201ENST00000408490 117 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 CHEK2P4-201ENST00000450340 246 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 AC005042.3-201ENST00000453230 174 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 MIR6740-201ENST00000618268 113 ntBASIC-0.26□□□□□ -2.45
HLA-DQB2P05538 MTND5P26-201ENST00000426018 1752 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 MIR644A-201ENST00000385262 94 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU6-332P-201ENST00000391193 108 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU7-185P-201ENST00000459215 60 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNA5SP268-201ENST00000516828 124 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU6-448P-201ENST00000517052 107 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU1-54P-201ENST00000517181 120 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 MIR6128-201ENST00000615528 109 ntBASIC-0.27□□□□□ -2.45
HLA-DQB2P05538 RNU6-451P-201ENST00000362921 107 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 RNU6-961P-201ENST00000363893 105 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 RNU6-514P-201ENST00000384208 107 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 MIR518F-201ENST00000384973 87 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 RNU6-780P-201ENST00000391030 104 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 MTND3P21-201ENST00000433774 331 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 MIR4743-201ENST00000584576 69 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 AC060780.3-201ENST00000589464 80 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 JPX_2.1-201ENST00000614161 69 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 AC124864.2-201ENST00000624736 186 ntBASIC-0.28□□□□□ -2.45
HLA-DQB2P05538 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 SNORA24-201ENST00000384096 131 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNU6-187P-201ENST00000384139 106 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNU6-929P-201ENST00000384429 107 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNU6-192P-201ENST00000391253 100 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 DEFB108C-201ENST00000400154 252 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 MIR548H2-201ENST00000408874 88 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNU6-1199P-201ENST00000411249 104 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 MTND1P17-201ENST00000448961 204 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 snoU13.16-201ENST00000459350 104 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 AC019235.1-201ENST00000503847 207 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNU6-864P-201ENST00000516256 108 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 AC145350.1-201ENST00000567426 208 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 NBR2-204ENST00000587322 63 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 MIR7107-201ENST00000611489 80 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 AL109933.3-201ENST00000619095 188 ntBASIC-0.29□□□□□ -2.46
HLA-DQB2P05538 RNY3P3-201ENST00000363816 102 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-1175P-201ENST00000365200 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-483P-201ENST00000384088 108 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6V-201ENST00000384105 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.473-201ENST00000384333 102 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 MIR760-201ENST00000390220 80 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 SNORA26.5-201ENST00000391215 123 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AC236972.2-201ENST00000434979 310 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-848P-201ENST00000515948 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-617P-201ENST00000516147 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-473P-201ENST00000516164 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-436P-201ENST00000516171 114 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-469P-201ENST00000516253 101 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AC006362.1-201ENST00000567392 174 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AC008507.4-201ENST00000585464 127 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AC121247.2-201ENST00000604776 136 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AC134878.1-201ENST00000619901 243 ntBASIC-0.3□□□□□ -2.46
HLA-DQB2P05538 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 RNU6-1165P-201ENST00000410119 107 ntBASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 RNU6-1088P-201ENST00000516850 104 ntBASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 AC006441.5-201ENST00000612680 209 ntBASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 AC022306.2-201ENST00000617563 647 ntBASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 SNORD38B-202ENST00000625943 69 ntBASIC-0.31□□□□□ -2.46
HLA-DQB2P05538 RNU6-926P-201ENST00000384075 107 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 MIR588-201ENST00000384900 83 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 AL512326.2-201ENST00000426359 151 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 AC010424.1-201ENST00000506336 297 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 RNU4-49P-201ENST00000516080 140 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 RNU6-155P-201ENST00000516347 100 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 MIR3908-201ENST00000579798 126 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 MIR4305-201ENST00000583252 102 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 AL355297.3-201ENST00000604082 446 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 MIR6828-201ENST00000636181 60 ntBASIC-0.32□□□□□ -2.46
HLA-DQB2P05538 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 RNU6-601P-201ENST00000384540 107 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.33□□□□□ -2.46
HLA-DQB2P05538 SNORD38B-201ENST00000384690 67 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms