Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 MIR6516-201ENST00000630554 81 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 MIR5087-201ENST00000635826 76 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 AL589743.1-201ENST00000551932 2712 ntBASIC0.56□□□□□ -2.32
MT-ND3P03897 Y_RNA.456-201ENST00000384232 111 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 Y_RNA.646-201ENST00000410980 101 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 AC244098.3-201ENST00000424803 96 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC0.55□□□□□ -2.32
MT-ND3P03897 AL157398.1-201ENST00000452981 186 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 RNU6-470P-201ENST00000515954 104 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 RNU6-830P-201ENST00000516353 107 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 AL355375.2-201ENST00000574825 175 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 MIR548AR-201ENST00000582191 57 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC0.55□□□□□ -2.32
MT-ND3P03897 U2.1-201ENST00000618978 145 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 AC010487.4-201ENST00000637027 61 ntBASIC0.55□□□□□ -2.32
MT-ND3P03897 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.55□□□□□ -2.32
MT-ND3P03897 Y_RNA.148-201ENST00000363557 117 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 RNU6-1188P-201ENST00000363795 107 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 Y_RNA.242-201ENST00000364473 110 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 Y_RNA.329-201ENST00000365209 107 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 Y_RNA.341-201ENST00000365341 102 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 RNU6-396P-201ENST00000365369 105 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 RNU6-310P-201ENST00000384655 107 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 MIR1302-7-201ENST00000408841 72 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 AC099799.1-201ENST00000439809 192 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 AC005042.3-201ENST00000453230 174 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 RNU7-169P-201ENST00000459456 61 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 MIR4711-201ENST00000578274 70 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 POLR3GP1-201ENST00000594073 261 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 AC243829.3-201ENST00000622177 108 ntBASIC0.54□□□□□ -2.32
MT-ND3P03897 Y_RNA.27-201ENST00000362540 103 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 Y_RNA.203-201ENST00000364106 102 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 MIR193B-201ENST00000384907 83 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC0.53□□□□□ -2.32
MT-ND3P03897 RNU6-496P-201ENST00000516145 99 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 RNU6-1007P-201ENST00000516586 107 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 Pinc.1-201ENST00000616452 154 ntBASIC0.53□□□□□ -2.32
MT-ND3P03897 Y_RNA.168-201ENST00000363740 102 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 Y_RNA.205-201ENST00000364128 113 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RNU4-40P-201ENST00000364351 143 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 Y_RNA.376-201ENST00000365638 108 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RNU6-1237P-201ENST00000384777 107 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RNA5SP222-201ENST00000411039 105 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 Y_RNA.655-201ENST00000515919 96 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RNU6-120P-201ENST00000516077 103 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RN7SKP12-201ENST00000516275 143 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 MIR2681-201ENST00000581814 105 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 AP003357.1-201ENST00000604497 148 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 AC093783.1-201ENST00000612976 329 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 TPTEP1-208ENST00000636884 213 ntBASIC0.52□□□□□ -2.33
MT-ND3P03897 RNU6-654P-201ENST00000364373 107 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 Y_RNA.279-201ENST00000364763 95 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 Y_RNA.314-201ENST00000365114 102 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 RNU6-1175P-201ENST00000365200 107 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 RNU6-890P-201ENST00000384121 107 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 RNU4-14P-201ENST00000410858 122 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 FGF7P6-202ENST00000451282 293 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 AC084782.3-201ENST00000612282 578 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 AC011476.5-201ENST00000615594 130 ntBASIC0.51□□□□□ -2.33
MT-ND3P03897 SNORA1.2-201ENST00000365189 134 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 SNORA36.2-201ENST00000384004 127 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 Y_RNA.537-201ENST00000384626 109 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 Y_RNA.653-201ENST00000459091 95 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 MIR1273G-201ENST00000577677 100 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 MIR5188-201ENST00000583467 113 ntBASIC0.5□□□□□ -2.33
MT-ND3P03897 RNU6-490P-201ENST00000362985 107 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 Y_RNA.160-201ENST00000363677 92 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 Y_RNA.310-201ENST00000365063 113 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 SNORA51.10-201ENST00000384418 136 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 Y_RNA.570-201ENST00000384750 101 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 SNORD28B-201ENST00000390993 75 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 U8.17-201ENST00000391292 132 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 AC114737.2-201ENST00000421583 173 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.49□□□□□ -2.33
MT-ND3P03897 MTND4P17-201ENST00000470444 350 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC0.49□□□□□ -2.33
MT-ND3P03897 SCARNA8-201ENST00000515924 131 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.49□□□□□ -2.33
MT-ND3P03897 AC068700.1-201ENST00000565862 3754 ntBASIC0.49□□□□□ -2.33
MT-ND3P03897 MT-TN-201ENST00000387400 73 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 RNA5SP193-201ENST00000410353 107 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 RPL30P15-201ENST00000457129 321 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 RPL23AP54-201ENST00000495129 419 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.48□□□□□ -2.33
MT-ND3P03897 RNU6-229P-201ENST00000516614 102 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 AC090155.2-201ENST00000518854 267 ntTSL 3 BASIC0.48□□□□□ -2.33
MT-ND3P03897 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC0.48□□□□□ -2.33
MT-ND3P03897 AC024405.2-202ENST00000532731 184 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 VN1R91P-201ENST00000594377 169 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 U6.92-201ENST00000636464 89 ntBASIC0.48□□□□□ -2.33
MT-ND3P03897 MIR377-201ENST00000362145 69 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 RNU4-45P-201ENST00000365469 141 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 RNY1P8-201ENST00000383970 114 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 SNORA50A-201ENST00000384225 134 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 Y_RNA.462-201ENST00000384268 102 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 RNU6-966P-201ENST00000516479 104 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 AC127455.1-201ENST00000565496 145 ntBASIC0.47□□□□□ -2.33
MT-ND3P03897 AC243829.6-201ENST00000612652 106 ntBASIC0.47□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms