Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A1P02462 FABP5P4-201ENST00000437203 171 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC0.33□□□□□ -2.36
COL4A1P02462 AC245047.8-201ENST00000456455 284 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC0.33□□□□□ -2.36
COL4A1P02462 RNU6-699P-201ENST00000517081 110 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AC022616.4-201ENST00000522985 181 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A1P02462 AC104695.3-201ENST00000604052 296 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AC022306.2-201ENST00000617563 647 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 TPTEP1-208ENST00000636884 213 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.80-201ENST00000362996 102 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.146-201ENST00000363549 102 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.170-201ENST00000363746 110 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.329-201ENST00000365209 107 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.485-201ENST00000384395 102 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 RNU6-710P-201ENST00000410424 105 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AL390729.2-201ENST00000416137 156 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 MRPS18CP6-201ENST00000423587 223 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 SUMO1P2-201ENST00000452524 304 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.33□□□□□ -2.36
COL4A1P02462 SNORD45.4-201ENST00000516629 73 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 SNORA74.3-201ENST00000517108 154 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Y_RNA.718-201ENST00000517110 102 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AL391903.3-201ENST00000612158 163 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AC092794.1-201ENST00000612734 582 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 AC025253.1-201ENST00000613623 543 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 Pinc.1-201ENST00000616452 154 ntBASIC0.33□□□□□ -2.36
COL4A1P02462 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.32□□□□□ -2.36
COL4A1P02462 MIR103A2-201ENST00000362154 78 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 SNORD81.2-201ENST00000365153 76 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 RNU6-767P-201ENST00000384132 107 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 Y_RNA.571-201ENST00000384753 98 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 MIR605-201ENST00000385078 83 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 RNU1-119P-201ENST00000391122 165 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 SNORA75.2-201ENST00000391138 150 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 RNU6-131P-201ENST00000391144 107 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 SNORA75.3-201ENST00000391231 150 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AL031003.1-201ENST00000404229 172 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 Y_RNA.646-201ENST00000410980 101 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AC138393.2-201ENST00000414742 246 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 MTND1P2-201ENST00000430604 821 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 SNRPGP10-201ENST00000432323 225 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A1P02462 FGF7P6-202ENST00000451282 293 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 PDCD5P2-201ENST00000507570 312 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 RNU7-43P-201ENST00000516554 64 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC0.32□□□□□ -2.36
COL4A1P02462 MIR5190-201ENST00000581537 80 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 MIR4723-201ENST00000585070 81 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AC060780.3-201ENST00000589464 80 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AC084782.3-201ENST00000612282 578 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 uc_338.17-201ENST00000619633 179 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 AL008636.1-201ENST00000625038 1018 ntBASIC0.32□□□□□ -2.36
COL4A1P02462 Y_RNA.27-201ENST00000362540 103 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 SNORD115-30-201ENST00000364117 82 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 Y_RNA.310-201ENST00000365063 113 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
COL4A1P02462 Y_RNA.456-201ENST00000384232 111 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 RNU6-30P-201ENST00000384561 107 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 SNORD41-201ENST00000386967 70 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 MIR873-201ENST00000401120 77 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.31□□□□□ -2.36
COL4A1P02462 Y_RNA.653-201ENST00000459091 95 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 U8.19-201ENST00000459095 133 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 RNU7-41P-201ENST00000515917 61 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 AC055872.1-201ENST00000570978 278 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 MIR4659A-201ENST00000580269 81 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 AC005176.2-201ENST00000596933 147 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 AC120024.3-201ENST00000603167 156 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 RBM11P1-201ENST00000604951 799 ntBASIC0.31□□□□□ -2.36
COL4A1P02462 U8.7-201ENST00000364940 136 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-396P-201ENST00000365369 105 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-1264P-201ENST00000383891 107 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 SNORD38C-201ENST00000384381 69 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-110P-201ENST00000384508 104 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 MIR1302-7-201ENST00000408841 72 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.599-201ENST00000410489 109 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.621-201ENST00000411065 96 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU2-61P-201ENST00000411069 191 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 AC078851.1-201ENST00000415918 298 ntTSL 3 BASIC0.3□□□□□ -2.36
COL4A1P02462 MTCO2P27-201ENST00000420740 428 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 AC096644.2-201ENST00000429278 159 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RPL30P15-201ENST00000457129 321 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-197P-201ENST00000516680 100 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-1213P-201ENST00000517075 94 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 DLEU2_2.2-201ENST00000615474 90 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 7SK.10-201ENST00000621414 298 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.3□□□□□ -2.36
COL4A1P02462 AL669831.3-213ENST00000636676 183 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.72-201ENST00000362894 103 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-490P-201ENST00000362985 107 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.142-201ENST00000363491 102 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.187-201ENST00000363918 113 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 Y_RNA.387-201ENST00000383918 102 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-926P-201ENST00000384075 107 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 RNU6-310P-201ENST00000384655 107 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 U8.17-201ENST00000391292 132 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 PDCL2P1-201ENST00000419302 352 ntBASIC0.3□□□□□ -2.36
COL4A1P02462 MTCO3P10-201ENST00000455912 772 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms