Protein–RNA interactions for Protein: P00558

PGK1, Phosphoglycerate kinase 1, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1P00558 AC090049.2-201ENST00000550377 109 ntBASIC1.01□□□□□ -2.25
PGK1P00558 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.01□□□□□ -2.25
PGK1P00558 MIR4714-201ENST00000580728 77 ntBASIC1.01□□□□□ -2.25
PGK1P00558 MIR4300-201ENST00000581016 96 ntBASIC1.01□□□□□ -2.25
PGK1P00558 HSPE1P19-201ENST00000603327 295 ntBASIC1.01□□□□□ -2.25
PGK1P00558 AL513534.2-201ENST00000603836 250 ntBASIC1.01□□□□□ -2.25
PGK1P00558 AC090574.1-201ENST00000623186 233 ntBASIC1.01□□□□□ -2.25
PGK1P00558 AC027335.2-201ENST00000624030 375 ntBASIC1.01□□□□□ -2.25
PGK1P00558 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1□□□□□ -2.25
PGK1P00558 Y_RNA.28-201ENST00000362554 111 ntBASIC1□□□□□ -2.25
PGK1P00558 SNORD68-201ENST00000363214 84 ntBASIC1□□□□□ -2.25
PGK1P00558 Y_RNA.621-201ENST00000411065 96 ntBASIC1□□□□□ -2.25
PGK1P00558 AC104332.1-201ENST00000440471 797 ntBASIC1□□□□□ -2.25
PGK1P00558 RNU6-397P-201ENST00000516226 104 ntBASIC1□□□□□ -2.25
PGK1P00558 AC005972.2-201ENST00000604690 348 ntBASIC1□□□□□ -2.25
PGK1P00558 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1□□□□□ -2.25
PGK1P00558 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1□□□□□ -2.25
PGK1P00558 RNU4-80P-201ENST00000363200 141 ntBASIC0.99□□□□□ -2.25
PGK1P00558 RNU6-833P-201ENST00000363486 107 ntBASIC0.99□□□□□ -2.25
PGK1P00558 Y_RNA.222-201ENST00000364264 102 ntBASIC0.99□□□□□ -2.25
PGK1P00558 SNORA22B-201ENST00000383876 138 ntBASIC0.99□□□□□ -2.25
PGK1P00558 Y_RNA.418-201ENST00000384029 102 ntBASIC0.99□□□□□ -2.25
PGK1P00558 SNORA72-201ENST00000384339 132 ntBASIC0.99□□□□□ -2.25
PGK1P00558 MIR522-201ENST00000385071 87 ntBASIC0.99□□□□□ -2.25
PGK1P00558 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.99□□□□□ -2.25
PGK1P00558 RNU6-121P-201ENST00000410525 99 ntBASIC0.99□□□□□ -2.25
PGK1P00558 HSPE1P25-201ENST00000455484 251 ntBASIC0.99□□□□□ -2.25
PGK1P00558 HMGN1P10-201ENST00000474557 553 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AC114811.1-201ENST00000507207 168 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AC022616.4-201ENST00000522985 181 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AC020661.2-201ENST00000560114 134 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AC103810.9-201ENST00000606688 112 ntBASIC0.99□□□□□ -2.25
PGK1P00558 GHRLOS.1-201ENST00000610995 70 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AC027279.3-201ENST00000625055 122 ntBASIC0.99□□□□□ -2.25
PGK1P00558 AL442644.1-201ENST00000454390 3105 ntBASIC0.98□□□□□ -2.25
PGK1P00558 Y_RNA.341-201ENST00000365341 102 ntBASIC0.98□□□□□ -2.25
PGK1P00558 RNU6-1323P-201ENST00000384025 107 ntBASIC0.98□□□□□ -2.25
PGK1P00558 Y_RNA.456-201ENST00000384232 111 ntBASIC0.98□□□□□ -2.25
PGK1P00558 RNU6-21P-201ENST00000384710 107 ntBASIC0.98□□□□□ -2.25
PGK1P00558 MIR891A-201ENST00000401237 79 ntBASIC0.98□□□□□ -2.25
PGK1P00558 MIR548P-201ENST00000408336 84 ntBASIC0.98□□□□□ -2.25
PGK1P00558 RNU6-710P-201ENST00000410424 105 ntBASIC0.98□□□□□ -2.25
PGK1P00558 snoU13.25-201ENST00000458945 104 ntBASIC0.98□□□□□ -2.25
PGK1P00558 SNORD116-28-201ENST00000516123 91 ntBASIC0.98□□□□□ -2.25
PGK1P00558 Y_RNA.713-201ENST00000517013 96 ntBASIC0.98□□□□□ -2.25
PGK1P00558 SNORA70.22-201ENST00000517160 124 ntBASIC0.98□□□□□ -2.25
PGK1P00558 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.98□□□□□ -2.25
PGK1P00558 AC124312.5-201ENST00000604451 268 ntBASIC0.98□□□□□ -2.25
PGK1P00558 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC0.98□□□□□ -2.25
PGK1P00558 RNU1-124P-201ENST00000363861 145 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU6-1048P-201ENST00000364054 107 ntBASIC0.97□□□□□ -2.25
PGK1P00558 Y_RNA.336-201ENST00000365307 109 ntBASIC0.97□□□□□ -2.25
PGK1P00558 SNORA2.2-201ENST00000365473 135 ntBASIC0.97□□□□□ -2.25
PGK1P00558 Y_RNA.383-201ENST00000383855 97 ntBASIC0.97□□□□□ -2.25
PGK1P00558 Y_RNA.424-201ENST00000384063 103 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU2-14P-201ENST00000411053 191 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU6-496P-201ENST00000516145 99 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU7-115P-201ENST00000516433 55 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU6-897P-201ENST00000517135 105 ntBASIC0.97□□□□□ -2.25
PGK1P00558 AC024405.2-202ENST00000532731 184 ntBASIC0.97□□□□□ -2.25
PGK1P00558 AC127455.1-201ENST00000565496 145 ntBASIC0.97□□□□□ -2.25
PGK1P00558 AP003357.1-201ENST00000604497 148 ntBASIC0.97□□□□□ -2.25
PGK1P00558 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC0.97□□□□□ -2.25
PGK1P00558 MIR376A1-201ENST00000616574 68 ntBASIC0.97□□□□□ -2.25
PGK1P00558 AC134503.1-201ENST00000633048 54 ntBASIC0.97□□□□□ -2.25
PGK1P00558 RNU6-797P-201ENST00000363101 109 ntBASIC0.96□□□□□ -2.26
PGK1P00558 Y_RNA.128-201ENST00000363391 112 ntBASIC0.96□□□□□ -2.26
PGK1P00558 SNORD113-8-201ENST00000363497 74 ntBASIC0.96□□□□□ -2.26
PGK1P00558 Y_RNA.363-201ENST00000365529 113 ntBASIC0.96□□□□□ -2.26
PGK1P00558 SNORA63.7-201ENST00000365579 123 ntBASIC0.96□□□□□ -2.26
PGK1P00558 RNU6-969P-201ENST00000383900 105 ntBASIC0.96□□□□□ -2.26
PGK1P00558 RNU6-163P-201ENST00000384396 106 ntBASIC0.96□□□□□ -2.26
PGK1P00558 AL451046.2-201ENST00000403074 277 ntBASIC0.96□□□□□ -2.26
PGK1P00558 MIR1252-201ENST00000408861 65 ntBASIC0.96□□□□□ -2.26
PGK1P00558 MTCO2P12-201ENST00000427426 682 ntBASIC0.96□□□□□ -2.26
PGK1P00558 POLR2KP2-201ENST00000438155 177 ntBASIC0.96□□□□□ -2.26
PGK1P00558 SNORA31.2-201ENST00000516019 134 ntBASIC0.96□□□□□ -2.26
PGK1P00558 SNORD111.1-201ENST00000516421 86 ntBASIC0.96□□□□□ -2.26
PGK1P00558 MIR3171-201ENST00000584270 74 ntBASIC0.96□□□□□ -2.26
PGK1P00558 FAM71BP1-201ENST00000604431 523 ntBASIC0.96□□□□□ -2.26
PGK1P00558 SNORD113-5-201ENST00000607261 78 ntBASIC0.96□□□□□ -2.26
PGK1P00558 AL096861.1-201ENST00000610899 123 ntBASIC0.96□□□□□ -2.26
PGK1P00558 MIR548AY-201ENST00000617669 107 ntBASIC0.96□□□□□ -2.26
PGK1P00558 Y_RNA.183-201ENST00000363882 113 ntBASIC0.95□□□□□ -2.26
PGK1P00558 RNU6-801P-201ENST00000364087 105 ntBASIC0.95□□□□□ -2.26
PGK1P00558 RNU6-1187P-201ENST00000364771 110 ntBASIC0.95□□□□□ -2.26
PGK1P00558 U8.7-201ENST00000364940 136 ntBASIC0.95□□□□□ -2.26
PGK1P00558 SNORA72.4-201ENST00000384174 132 ntBASIC0.95□□□□□ -2.26
PGK1P00558 SNORD115-46-201ENST00000390982 71 ntBASIC0.95□□□□□ -2.26
PGK1P00558 SNORA26.5-201ENST00000391215 123 ntBASIC0.95□□□□□ -2.26
PGK1P00558 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC0.95□□□□□ -2.26
PGK1P00558 MTCYBP6-201ENST00000441810 138 ntBASIC0.95□□□□□ -2.26
PGK1P00558 AC048334.1-201ENST00000477975 159 ntBASIC0.95□□□□□ -2.26
PGK1P00558 MIR4680-201ENST00000580906 66 ntBASIC0.95□□□□□ -2.26
PGK1P00558 AC108706.1-201ENST00000611053 297 ntBASIC0.95□□□□□ -2.26
PGK1P00558 AC068700.1-201ENST00000565862 3754 ntBASIC0.95□□□□□ -2.26
PGK1P00558 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.94□□□□□ -2.26
PGK1P00558 Y_RNA.26-201ENST00000362539 101 ntBASIC0.94□□□□□ -2.26
PGK1P00558 Y_RNA.136-201ENST00000363444 102 ntBASIC0.94□□□□□ -2.26
PGK1P00558 SNORD50B-201ENST00000364995 70 ntBASIC0.94□□□□□ -2.26
Retrieved 100 of 98,524 protein–RNA pairs in 126.9 ms