Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 RNU6-445P-201ENST00000516949 107 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AP003168.1-201ENST00000530091 307 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-0.59□□□□□ -2.5
ABCA1O95477 AC245008.1-201ENST00000608123 476 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AC073869.9-201ENST00000641610 120 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AP003174.1-201ENST00000306533 376 ntTSL 2 BASIC-0.59□□□□□ -2.5
ABCA1O95477 RNU4-68P-201ENST00000364314 141 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.59□□□□□ -2.5
ABCA1O95477 RPL30P10-201ENST00000488148 337 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 MIR4499-201ENST00000584834 69 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AC008608.1-201ENST00000603910 127 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AC011458.1-201ENST00000604034 617 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 AC091304.10-201ENST00000641554 121 ntBASIC-0.59□□□□□ -2.5
ABCA1O95477 RNU6-1115P-201ENST00000362490 106 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 RNU6-119P-201ENST00000364882 107 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 Y_RNA.319-201ENST00000365138 92 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 SNORA72-201ENST00000384339 132 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 AL138752.1-201ENST00000452964 351 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 TPTE2P5-203ENST00000458118 728 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 MIR5692C1-201ENST00000585309 91 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 AC121247.2-201ENST00000604776 136 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 AL121757.2-201ENST00000611223 313 ntBASIC-0.6□□□□□ -2.51
ABCA1O95477 Y_RNA.57-201ENST00000362806 113 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 SNORD114-25-201ENST00000363742 72 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 SNORD38B-201ENST00000384690 67 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 AC073415.1-201ENST00000449240 153 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 SNORA27.4-201ENST00000516650 95 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 SNORA18.6-201ENST00000516792 115 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 Y_RNA.86-201ENST00000363020 111 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 HLA-S-202ENST00000425174 53 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 AL593851.1-201ENST00000426171 157 ntBASIC-0.61□□□□□ -2.51
ABCA1O95477 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 RNU6-1329P-201ENST00000365664 107 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR215-201ENST00000384858 110 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR518F-201ENST00000384973 87 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.62□□□□□ -2.51
ABCA1O95477 RNU6-1242P-201ENST00000391052 103 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 SNORA18.4-201ENST00000516440 124 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 AC105029.1-201ENST00000520250 669 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 ZNF299P-201ENST00000406845 1804 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 RNU6-281P-201ENST00000384212 103 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR516B1-201ENST00000385211 90 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 RNU6-855P-201ENST00000410395 104 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 LINC00363-201ENST00000443228 210 ntTSL 5 BASIC-0.62□□□□□ -2.51
ABCA1O95477 Y_RNA.648-201ENST00000459455 110 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR3152-201ENST00000579801 74 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR4306-201ENST00000583390 91 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 AC069431.2-201ENST00000604149 1099 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 AL158211.2-201ENST00000607282 395 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 AC103705.1-201ENST00000619013 241 ntBASIC-0.62□□□□□ -2.51
ABCA1O95477 MIR655-201ENST00000362159 97 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 Y_RNA.151-201ENST00000363566 112 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU6-454P-201ENST00000364292 107 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 Y_RNA.243-201ENST00000364481 109 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 MT-TY-201ENST00000387409 66 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU6-1000P-201ENST00000391066 106 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 MTCO2P30-201ENST00000503662 364 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 MIR5583-1-201ENST00000580941 59 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 CLPTM1LP1-201ENST00000604519 484 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AC087683.2-201ENST00000611384 326 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AL158063.1-201ENST00000615349 536 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AC010332.2-201ENST00000613083 1904 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU5F-7P-201ENST00000363696 115 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU6-74P-201ENST00000384235 107 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 Y_RNA.490-201ENST00000384413 102 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU6-456P-201ENST00000384493 107 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AL606923.1-201ENST00000406616 190 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 SNORD93-201ENST00000408813 74 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU2-9P-201ENST00000410194 145 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AL031667.1-201ENST00000440222 725 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 SNORD123-201ENST00000459473 70 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU6-1114P-201ENST00000516022 107 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 FRG2DP-202ENST00000566967 323 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 MIR5696-201ENST00000578474 85 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AC020891.4-201ENST00000605745 93 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 CLRN1-AS1.1-201ENST00000615643 79 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 AC105081.1-201ENST00000617727 106 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 U6.115-201ENST00000636045 103 ntBASIC-0.63□□□□□ -2.51
ABCA1O95477 RNU4-16P-201ENST00000364737 141 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 RNU6-47P-201ENST00000383866 107 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 Y_RNA.475-201ENST00000384345 101 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 MIRLET7F2-201ENST00000385277 83 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 MIR450B-201ENST00000401182 78 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 AC131281.1-201ENST00000522984 164 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 AC040926.1-201ENST00000530195 238 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 AC005972.2-201ENST00000604690 348 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 JPX_2.1-201ENST00000614161 69 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 TUG1_4.1-201ENST00000619464 181 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 AC023510.2-201ENST00000622162 746 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC-0.64□□□□□ -2.51
ABCA1O95477 RNY1P16-201ENST00000363063 111 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC-0.64□□□□□ -2.51
ABCA1O95477 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC-0.64□□□□□ -2.51
ABCA1O95477 AP003461.1-201ENST00000528866 78 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 ELOCP32-201ENST00000548625 324 ntBASIC-0.64□□□□□ -2.51
ABCA1O95477 MIR4424-201ENST00000585257 86 ntBASIC-0.64□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms