Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 RNU6-1065P-201ENST00000384513 106 ntBASIC1.4□□□□□ -2.19
GPC4O75487 SNORD41-201ENST00000386967 70 ntBASIC1.4□□□□□ -2.19
GPC4O75487 SNORA53-201ENST00000391141 249 ntBASIC1.4□□□□□ -2.19
GPC4O75487 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.4□□□□□ -2.19
GPC4O75487 RNU6-165P-201ENST00000517170 99 ntBASIC1.4□□□□□ -2.19
GPC4O75487 AL512605.2-201ENST00000592972 256 ntBASIC1.4□□□□□ -2.19
GPC4O75487 AC136443.5-201ENST00000603741 370 ntBASIC1.4□□□□□ -2.19
GPC4O75487 AP001282.2-201ENST00000616149 309 ntBASIC1.4□□□□□ -2.19
GPC4O75487 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.4□□□□□ -2.19
GPC4O75487 SNORA25.1-201ENST00000362326 128 ntBASIC1.39□□□□□ -2.19
GPC4O75487 Y_RNA.47-201ENST00000362697 108 ntBASIC1.39□□□□□ -2.19
GPC4O75487 Y_RNA.145-201ENST00000363527 102 ntBASIC1.39□□□□□ -2.19
GPC4O75487 Y_RNA.396-201ENST00000383949 103 ntBASIC1.39□□□□□ -2.19
GPC4O75487 Y_RNA.461-201ENST00000384263 103 ntBASIC1.39□□□□□ -2.19
GPC4O75487 RNU6-574P-201ENST00000384265 107 ntBASIC1.39□□□□□ -2.19
GPC4O75487 MT-TW-201ENST00000387382 68 ntBASIC1.39□□□□□ -2.19
GPC4O75487 RNU4-62P-201ENST00000410125 130 ntBASIC1.39□□□□□ -2.19
GPC4O75487 RNU6-437P-201ENST00000459408 95 ntBASIC1.39□□□□□ -2.19
GPC4O75487 SERF1AP1-201ENST00000514575 187 ntBASIC1.39□□□□□ -2.19
GPC4O75487 RNA5SP61-201ENST00000516453 100 ntBASIC1.39□□□□□ -2.19
GPC4O75487 SNORD45.4-201ENST00000516629 73 ntBASIC1.39□□□□□ -2.19
GPC4O75487 SNORA27.4-201ENST00000516650 95 ntBASIC1.39□□□□□ -2.19
GPC4O75487 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.39□□□□□ -2.19
GPC4O75487 AC090049.2-201ENST00000550377 109 ntBASIC1.39□□□□□ -2.19
GPC4O75487 AL513534.2-201ENST00000603836 250 ntBASIC1.39□□□□□ -2.19
GPC4O75487 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
GPC4O75487 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.39□□□□□ -2.19
GPC4O75487 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
GPC4O75487 MIR378A-201ENST00000362177 66 ntBASIC1.38□□□□□ -2.19
GPC4O75487 RNU6-1084P-201ENST00000362498 107 ntBASIC1.38□□□□□ -2.19
GPC4O75487 Y_RNA.117-201ENST00000363294 101 ntBASIC1.38□□□□□ -2.19
GPC4O75487 RNU6-899P-201ENST00000363947 107 ntBASIC1.38□□□□□ -2.19
GPC4O75487 Y_RNA.237-201ENST00000364439 102 ntBASIC1.38□□□□□ -2.19
GPC4O75487 RNU6-969P-201ENST00000383900 105 ntBASIC1.38□□□□□ -2.19
GPC4O75487 Y_RNA.574-201ENST00000384766 95 ntBASIC1.38□□□□□ -2.19
GPC4O75487 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
GPC4O75487 RNU6-131P-201ENST00000391144 107 ntBASIC1.38□□□□□ -2.19
GPC4O75487 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.38□□□□□ -2.19
GPC4O75487 MIR1298-201ENST00000408783 112 ntBASIC1.38□□□□□ -2.19
GPC4O75487 TRBVB-201ENST00000477100 408 ntBASIC1.38□□□□□ -2.19
GPC4O75487 NDUFA4P2-201ENST00000489989 244 ntBASIC1.38□□□□□ -2.19
GPC4O75487 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.38□□□□□ -2.19
GPC4O75487 AL512598.1-201ENST00000610158 273 ntBASIC1.38□□□□□ -2.19
GPC4O75487 AC013791.1-201ENST00000616619 62 ntBASIC1.38□□□□□ -2.19
GPC4O75487 snoU18.1-201ENST00000629629 71 ntBASIC1.38□□□□□ -2.19
GPC4O75487 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
GPC4O75487 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.37□□□□□ -2.19
GPC4O75487 RNU6-1272P-201ENST00000362776 107 ntBASIC1.37□□□□□ -2.19
GPC4O75487 Y_RNA.176-201ENST00000363815 109 ntBASIC1.37□□□□□ -2.19
GPC4O75487 RNU6-674P-201ENST00000363831 107 ntBASIC1.37□□□□□ -2.19
GPC4O75487 Y_RNA.217-201ENST00000364214 105 ntBASIC1.37□□□□□ -2.19
GPC4O75487 RNU4-10P-201ENST00000364383 140 ntBASIC1.37□□□□□ -2.19
GPC4O75487 SNORA2.2-201ENST00000365473 135 ntBASIC1.37□□□□□ -2.19
GPC4O75487 RNU6-514P-201ENST00000384208 107 ntBASIC1.37□□□□□ -2.19
GPC4O75487 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.37□□□□□ -2.19
GPC4O75487 BTF3P4-201ENST00000418852 495 ntBASIC1.37□□□□□ -2.19
GPC4O75487 BTF3P11-201ENST00000426582 477 ntBASIC1.37□□□□□ -2.19
GPC4O75487 RPS29P23-201ENST00000458635 123 ntBASIC1.37□□□□□ -2.19
GPC4O75487 Y_RNA.641-201ENST00000459414 105 ntBASIC1.37□□□□□ -2.19
GPC4O75487 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.37□□□□□ -2.19
GPC4O75487 FAM106DP-201ENST00000586416 501 ntBASIC1.37□□□□□ -2.19
GPC4O75487 AL008718.3-201ENST00000610217 321 ntBASIC1.37□□□□□ -2.19
GPC4O75487 MIR8062-201ENST00000621515 85 ntBASIC1.37□□□□□ -2.19
GPC4O75487 RNU6-383P-201ENST00000410864 94 ntBASIC1.36□□□□□ -2.19
GPC4O75487 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
GPC4O75487 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.36□□□□□ -2.19
GPC4O75487 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.36□□□□□ -2.19
GPC4O75487 AL117187.1-201ENST00000555482 181 ntBASIC1.36□□□□□ -2.19
GPC4O75487 RPL23AP91-201ENST00000569211 455 ntBASIC1.36□□□□□ -2.19
GPC4O75487 AC037487.3-201ENST00000606668 112 ntBASIC1.36□□□□□ -2.19
GPC4O75487 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
GPC4O75487 ZNF209P-201ENST00000593450 2304 ntBASIC1.35□□□□□ -2.19
GPC4O75487 Y_RNA.54-201ENST00000362766 105 ntBASIC1.35□□□□□ -2.19
GPC4O75487 RNU6-472P-201ENST00000384299 107 ntBASIC1.35□□□□□ -2.19
GPC4O75487 MIR516B2-201ENST00000385190 85 ntBASIC1.35□□□□□ -2.19
GPC4O75487 MIR1302-6-201ENST00000408466 90 ntBASIC1.35□□□□□ -2.19
GPC4O75487 RNU6-651P-201ENST00000411040 105 ntBASIC1.35□□□□□ -2.19
GPC4O75487 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.35□□□□□ -2.19
GPC4O75487 AL358176.2-201ENST00000425769 204 ntBASIC1.35□□□□□ -2.19
GPC4O75487 MTND4LP30-201ENST00000454092 297 ntBASIC1.35□□□□□ -2.19
GPC4O75487 RN7SKP88-201ENST00000516847 250 ntBASIC1.35□□□□□ -2.19
GPC4O75487 AL161670.1-201ENST00000554348 137 ntBASIC1.35□□□□□ -2.19
GPC4O75487 DNAJC19P9-201ENST00000555084 351 ntBASIC1.35□□□□□ -2.19
GPC4O75487 MIR5692C2-201ENST00000577959 77 ntBASIC1.35□□□□□ -2.19
GPC4O75487 MIR4719-201ENST00000585233 84 ntBASIC1.35□□□□□ -2.19
GPC4O75487 GHRLOS.1-201ENST00000610995 70 ntBASIC1.35□□□□□ -2.19
GPC4O75487 7SK.8-201ENST00000612110 250 ntBASIC1.35□□□□□ -2.19
GPC4O75487 JPX_2.1-201ENST00000614161 69 ntBASIC1.35□□□□□ -2.19
GPC4O75487 7SK.11-201ENST00000615477 250 ntBASIC1.35□□□□□ -2.19
GPC4O75487 7SK.13-201ENST00000622040 250 ntBASIC1.35□□□□□ -2.19
GPC4O75487 UBE2WP1-201ENST00000362030 340 ntBASIC1.34□□□□□ -2.19
GPC4O75487 RNU6-1205P-201ENST00000363625 106 ntBASIC1.34□□□□□ -2.19
GPC4O75487 snoU2-30.1-201ENST00000365012 70 ntBASIC1.34□□□□□ -2.19
GPC4O75487 Y_RNA.477-201ENST00000384352 108 ntBASIC1.34□□□□□ -2.19
GPC4O75487 MIR568-201ENST00000385036 95 ntBASIC1.34□□□□□ -2.19
GPC4O75487 AL451046.2-201ENST00000403074 277 ntBASIC1.34□□□□□ -2.19
GPC4O75487 RNU2-38P-201ENST00000410856 79 ntBASIC1.34□□□□□ -2.19
GPC4O75487 RNU7-95P-201ENST00000459222 64 ntBASIC1.34□□□□□ -2.19
GPC4O75487 RPL30P7-201ENST00000479312 323 ntBASIC1.34□□□□□ -2.19
GPC4O75487 RNU6-1045P-201ENST00000516321 107 ntBASIC1.34□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms