Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC-0.74□□□□□ -2.53
USH2AO75445 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-1324P-201ENST00000384222 107 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 Y_RNA.617-201ENST00000410920 90 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-592P-201ENST00000411333 103 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 snoU13.8-201ENST00000458890 104 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC131281.1-201ENST00000522984 164 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 MIR4490-201ENST00000582647 84 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
USH2AO75445 PART1_1.1-201ENST00000611761 217 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 MIR6082-201ENST00000613604 109 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 snoR1.1-201ENST00000628177 80 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-1313P-201ENST00000362622 102 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 Y_RNA.137-201ENST00000363455 112 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 SNORD82-201ENST00000365530 70 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 SNORA75.4-201ENST00000391278 119 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC-0.75□□□□□ -2.53
USH2AO75445 ZNF736P12Y-201ENST00000443152 1243 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 ZNF736P4Y-201ENST00000454995 1243 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC-0.75□□□□□ -2.53
USH2AO75445 SNORA62.4-201ENST00000365504 151 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-125P-201ENST00000384505 107 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU2-13P-201ENST00000515909 113 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-175P-201ENST00000516896 107 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 Y_RNA.718-201ENST00000517110 102 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AL356055.1-201ENST00000602528 446 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AL731768.1-201ENST00000603124 139 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC027279.3-201ENST00000625055 122 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-1251P-201ENST00000364502 107 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 MTND1P26-201ENST00000440488 538 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC116353.2-201ENST00000505332 712 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.75□□□□□ -2.53
USH2AO75445 AC120024.3-201ENST00000603167 156 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 uc_338.4-201ENST00000616635 176 ntBASIC-0.75□□□□□ -2.53
USH2AO75445 RNU6-1277P-201ENST00000364561 107 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MRPL42P3-201ENST00000401492 326 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC007283.2-201ENST00000424739 197 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC245047.3-201ENST00000429428 127 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AL353572.1-201ENST00000442490 417 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MTND1P27-201ENST00000451117 902 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU2-11P-201ENST00000459191 187 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-1291P-201ENST00000516591 104 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU2-56P-201ENST00000516826 190 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-958P-201ENST00000516995 106 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MTND1P8-201ENST00000571424 950 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC-0.76□□□□□ -2.53
USH2AO75445 Y_RNA.14-201ENST00000362415 103 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-208P-201ENST00000362431 107 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-766P-201ENST00000362478 107 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-79P-201ENST00000362511 107 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-509P-201ENST00000363519 107 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-596P-201ENST00000365395 98 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 Y_RNA.349-201ENST00000365406 102 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC114491.1-201ENST00000416095 246 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AL512347.1-201ENST00000566420 503 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC011373.1-201ENST00000607270 237 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AL008636.1-201ENST00000625038 1018 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 Y_RNA.229-201ENST00000364347 113 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 SNORD38B-201ENST00000384690 67 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MIR19A-201ENST00000384878 82 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU2-9P-201ENST00000410194 145 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AL354751.2-201ENST00000415471 210 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC244090.1-201ENST00000441884 93 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC025459.1-201ENST00000504072 156 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC068587.5-201ENST00000528506 175 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MIR369-201ENST00000362155 70 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 SNORD115-4-201ENST00000363810 82 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 MT-TF-201ENST00000387314 71 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RPS3AP52-201ENST00000435639 297 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC117522.1-201ENST00000509821 380 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 RNU7-28P-201ENST00000516759 62 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC078795.2-201ENST00000602835 1252 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AC145423.2-201ENST00000610631 239 ntBASIC-0.76□□□□□ -2.53
USH2AO75445 AL359634.1-202ENST00000404721 284 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL451054.2-201ENST00000420896 202 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AC074290.1-201ENST00000448883 135 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 RPL39P25-201ENST00000449384 154 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL122001.1-201ENST00000457027 370 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AC025647.1-201ENST00000517879 253 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL137161.1-201ENST00000532231 390 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AP001033.2-201ENST00000609701 1003 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL139418.1-201ENST00000613613 177 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 MIR5683-201ENST00000636514 76 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 SNORD65-201ENST00000391079 73 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 SNORA26.4-201ENST00000391188 123 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL121872.1-201ENST00000420327 281 ntTSL 5 BASIC-0.77□□□□□ -2.53
USH2AO75445 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC-0.77□□□□□ -2.53
USH2AO75445 Y_RNA.46-201ENST00000362695 102 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AC005002.2-201ENST00000438228 269 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC-0.77□□□□□ -2.53
USH2AO75445 AC008494.2-201ENST00000514544 370 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 MTND5P40-201ENST00000559945 246 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 AC135050.6-201ENST00000610813 528 ntTSL 3 BASIC-0.77□□□□□ -2.53
USH2AO75445 RNU6-562P-201ENST00000362731 107 ntBASIC-0.77□□□□□ -2.53
USH2AO75445 SNORD115-21-201ENST00000362963 81 ntBASIC-0.77□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 253.4 ms