Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.82□□□□□ -1.96
PRPF40AO75400 AC005336.3-201ENST00000623833 2679 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
PRPF40AO75400 ICE2P2-201ENST00000483823 2787 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 SNORD24-201ENST00000383884 75 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 AL158823.1-201ENST00000418441 478 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 MTND4LP9-201ENST00000427694 174 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 HSPE1P9-201ENST00000440046 311 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 SNRPGP13-201ENST00000442212 177 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 HMGN2P32-201ENST00000444648 269 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 AL513328.1-201ENST00000446460 224 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.82□□□□□ -1.96
PRPF40AO75400 SNORA31.25-201ENST00000517242 134 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 AP001328.1-201ENST00000528550 176 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 SUB1P4-201ENST00000566062 339 ntBASIC2.82□□□□□ -1.96
PRPF40AO75400 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.82□□□□□ -1.96
PRPF40AO75400 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.82□□□□□ -1.96
PRPF40AO75400 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
PRPF40AO75400 SNORA67.1-201ENST00000364749 141 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 RNU6-163P-201ENST00000384396 106 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 RNU6-1117P-201ENST00000384525 104 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 RNA5SP450-201ENST00000411206 102 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 RNU6-693P-201ENST00000516134 107 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 AC007751.1-201ENST00000529260 376 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 TUG1_4.1-201ENST00000619464 181 ntBASIC2.81□□□□□ -1.96
PRPF40AO75400 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PRPF40AO75400 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.8□□□□□ -1.96
PRPF40AO75400 Y_RNA.336-201ENST00000365307 109 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 SNORA4.2-201ENST00000365313 147 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 SNORD61-201ENST00000384252 73 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 Y_RNA.542-201ENST00000384641 111 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 SNORA80E-201ENST00000384744 137 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 MIR524-201ENST00000385242 87 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 RNA5SP127-201ENST00000411051 133 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 RNU7-34P-201ENST00000459394 64 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 RPL23AP63-201ENST00000498752 471 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 CYCTP-201ENST00000504253 315 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 AC007336.1-201ENST00000576365 3828 ntBASIC2.8□□□□□ -1.96
PRPF40AO75400 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF40AO75400 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.79□□□□□ -1.96
PRPF40AO75400 RNU6-888P-201ENST00000363010 101 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 RNA5SP68-201ENST00000363885 119 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 Y_RNA.251-201ENST00000364551 99 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 MIR539-201ENST00000365690 78 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 RNU6-959P-201ENST00000384671 107 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 AL135790.1-201ENST00000427161 157 ntTSL 3 BASIC2.79□□□□□ -1.96
PRPF40AO75400 RNA5SP481-201ENST00000516814 122 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 MIR3129-201ENST00000581095 76 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 AC131055.1-201ENST00000584626 316 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 AL365205.2-201ENST00000594586 68 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 AC078899.2-201ENST00000595282 212 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 AC011603.4-201ENST00000611325 277 ntBASIC2.79□□□□□ -1.96
PRPF40AO75400 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.79□□□□□ -1.96
PRPF40AO75400 ZNF720P1-201ENST00000562403 1939 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF40AO75400 RNU6-112P-201ENST00000363599 104 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 AC114811.1-201ENST00000507207 168 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 RNU6-62P-201ENST00000516526 102 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 RNA5SP437-201ENST00000517249 129 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 MIR6817-201ENST00000615588 66 ntBASIC2.78□□□□□ -1.96
PRPF40AO75400 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PRPF40AO75400 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
PRPF40AO75400 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
PRPF40AO75400 RNY1P11-201ENST00000363759 113 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 RNU6-915P-201ENST00000364943 103 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 SNORD18B-201ENST00000365659 72 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 MIR144-201ENST00000384886 86 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 MIR548I2-201ENST00000408348 149 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 MIR548O-201ENST00000408583 114 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 RNU6-1211P-201ENST00000459179 105 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 RNA5SP148-201ENST00000516527 94 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 MIR4709-201ENST00000577272 72 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 MIR548AI-201ENST00000579940 88 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 AC006441.5-201ENST00000612680 209 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 AC245884.12-201ENST00000615364 59 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 AP001340.1-201ENST00000624405 217 ntBASIC2.77□□□□□ -1.97
PRPF40AO75400 RNU4-82P-201ENST00000362443 140 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 SNORA1-201ENST00000384107 130 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 RNU6-1081P-201ENST00000384537 107 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 RNU6-1031P-201ENST00000384773 107 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 MIR27B-201ENST00000385129 97 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 MIR624-201ENST00000385217 97 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 CALM2P4-201ENST00000430810 426 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 RNU6-971P-201ENST00000516920 106 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 RNU6-1116P-201ENST00000517269 99 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 U7.2-201ENST00000607576 63 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 AC067747.1-201ENST00000608026 250 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.76□□□□□ -1.97
PRPF40AO75400 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF40AO75400 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
PRPF40AO75400 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.76□□□□□ -1.97
PRPF40AO75400 RNU6-268P-201ENST00000364174 107 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 RNU6-296P-201ENST00000384608 107 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 snoU13.27-201ENST00000459278 104 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 HMSD-204ENST00000526932 162 ntTSL 3 BASIC2.75□□□□□ -1.97
PRPF40AO75400 U4.3-201ENST00000621047 82 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 AC027279.3-201ENST00000625055 122 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.75□□□□□ -1.97
PRPF40AO75400 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 173.6 ms