Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 DEFB131A-201ENST00000334879 213 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
PRKNO60260 MIR367-201ENST00000362299 68 ntBASIC1.57□□□□□ -2.16
PRKNO60260 Y_RNA.265-201ENST00000364677 108 ntBASIC1.57□□□□□ -2.16
PRKNO60260 RNU6-144P-201ENST00000383951 107 ntBASIC1.57□□□□□ -2.16
PRKNO60260 SNORA17.3-201ENST00000391159 129 ntBASIC1.57□□□□□ -2.16
PRKNO60260 MIR1278-201ENST00000408753 81 ntBASIC1.57□□□□□ -2.16
PRKNO60260 Y_RNA.793-201ENST00000411222 111 ntBASIC1.57□□□□□ -2.16
PRKNO60260 AC009310.1-201ENST00000414414 451 ntBASIC1.57□□□□□ -2.16
PRKNO60260 AL353743.2-204ENST00000456242 419 ntTSL 3 BASIC1.57□□□□□ -2.16
PRKNO60260 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.57□□□□□ -2.16
PRKNO60260 SNORA31.10-201ENST00000516482 106 ntBASIC1.57□□□□□ -2.16
PRKNO60260 RNU6-182P-201ENST00000516970 105 ntBASIC1.57□□□□□ -2.16
PRKNO60260 MIR3683-201ENST00000580847 82 ntBASIC1.57□□□□□ -2.16
PRKNO60260 Z83818.1-201ENST00000603584 150 ntBASIC1.57□□□□□ -2.16
PRKNO60260 AC098479.1-201ENST00000609225 154 ntBASIC1.57□□□□□ -2.16
PRKNO60260 AC004792.1-201ENST00000614523 137 ntBASIC1.57□□□□□ -2.16
PRKNO60260 RNU6-653P-201ENST00000363074 106 ntBASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.203-201ENST00000364106 102 ntBASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.238-201ENST00000364441 102 ntBASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.262-201ENST00000364641 102 ntBASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.308-201ENST00000365043 101 ntBASIC1.56□□□□□ -2.16
PRKNO60260 SNORA8.3-201ENST00000384679 139 ntBASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.572-201ENST00000384757 98 ntBASIC1.56□□□□□ -2.16
PRKNO60260 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.56□□□□□ -2.16
PRKNO60260 STAG3L5P-204ENST00000443759 179 ntBASIC1.56□□□□□ -2.16
PRKNO60260 RNU7-34P-201ENST00000459394 64 ntBASIC1.56□□□□□ -2.16
PRKNO60260 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.56□□□□□ -2.16
PRKNO60260 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.56□□□□□ -2.16
PRKNO60260 AC100767.1-201ENST00000528178 123 ntBASIC1.56□□□□□ -2.16
PRKNO60260 MIR4724-201ENST00000579485 89 ntBASIC1.56□□□□□ -2.16
PRKNO60260 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.802-201ENST00000614892 130 ntBASIC1.56□□□□□ -2.16
PRKNO60260 FTX_2.1-201ENST00000618816 94 ntBASIC1.56□□□□□ -2.16
PRKNO60260 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.56□□□□□ -2.16
PRKNO60260 Y_RNA.24-201ENST00000362508 103 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU6-1020P-201ENST00000363684 107 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU4-41P-201ENST00000364426 143 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU6-923P-201ENST00000364753 107 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU6-47P-201ENST00000383866 107 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU6-209P-201ENST00000384118 107 ntBASIC1.55□□□□□ -2.16
PRKNO60260 Y_RNA.555-201ENST00000384673 110 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNU6-493P-201ENST00000391321 108 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RN7SKP200-201ENST00000410564 320 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNA5SP247-201ENST00000411181 105 ntBASIC1.55□□□□□ -2.16
PRKNO60260 COX6CP10-201ENST00000416832 224 ntBASIC1.55□□□□□ -2.16
PRKNO60260 MLLT10P1-201ENST00000418346 262 ntBASIC1.55□□□□□ -2.16
PRKNO60260 snoU13.27-201ENST00000459278 104 ntBASIC1.55□□□□□ -2.16
PRKNO60260 RNA5SP481-201ENST00000516814 122 ntBASIC1.55□□□□□ -2.16
PRKNO60260 AL358944.1-201ENST00000528537 144 ntBASIC1.55□□□□□ -2.16
PRKNO60260 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PRKNO60260 AP002392.1-201ENST00000537692 208 ntBASIC1.55□□□□□ -2.16
PRKNO60260 MIR4308-201ENST00000580634 81 ntBASIC1.55□□□□□ -2.16
PRKNO60260 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
PRKNO60260 SNORD68-201ENST00000363214 84 ntBASIC1.54□□□□□ -2.16
PRKNO60260 Y_RNA.164-201ENST00000363709 102 ntBASIC1.54□□□□□ -2.16
PRKNO60260 RNU6-674P-201ENST00000363831 107 ntBASIC1.54□□□□□ -2.16
PRKNO60260 Y_RNA.253-201ENST00000364562 112 ntBASIC1.54□□□□□ -2.16
PRKNO60260 RNU6-969P-201ENST00000383900 105 ntBASIC1.54□□□□□ -2.16
PRKNO60260 RNU6-950P-201ENST00000384651 107 ntBASIC1.54□□□□□ -2.16
PRKNO60260 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.54□□□□□ -2.16
PRKNO60260 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.54□□□□□ -2.16
PRKNO60260 RNU7-120P-201ENST00000459334 63 ntBASIC1.54□□□□□ -2.16
PRKNO60260 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.54□□□□□ -2.16
PRKNO60260 RPL23AP91-201ENST00000569211 455 ntBASIC1.54□□□□□ -2.16
PRKNO60260 MIR4709-201ENST00000577272 72 ntBASIC1.54□□□□□ -2.16
PRKNO60260 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.54□□□□□ -2.16
PRKNO60260 MIR4255-201ENST00000579351 72 ntBASIC1.54□□□□□ -2.16
PRKNO60260 MIR3618-201ENST00000580330 88 ntBASIC1.54□□□□□ -2.16
PRKNO60260 AP000942.3-201ENST00000603702 160 ntBASIC1.54□□□□□ -2.16
PRKNO60260 MIR502-201ENST00000606349 86 ntBASIC1.54□□□□□ -2.16
PRKNO60260 AL591926.4-201ENST00000616895 298 ntBASIC1.54□□□□□ -2.16
PRKNO60260 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
PRKNO60260 MIR126-201ENST00000362291 85 ntBASIC1.53□□□□□ -2.16
PRKNO60260 RNU6-1209P-201ENST00000363655 107 ntBASIC1.53□□□□□ -2.16
PRKNO60260 RNU4-17P-201ENST00000365598 141 ntBASIC1.53□□□□□ -2.16
PRKNO60260 MIR626-201ENST00000385032 94 ntBASIC1.53□□□□□ -2.16
PRKNO60260 MIR526A2-201ENST00000390198 65 ntBASIC1.53□□□□□ -2.16
PRKNO60260 RNU6-918P-201ENST00000391219 106 ntBASIC1.53□□□□□ -2.16
PRKNO60260 RPL31P63-201ENST00000422565 375 ntBASIC1.53□□□□□ -2.16
PRKNO60260 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
PRKNO60260 HMGN1P7-201ENST00000491722 313 ntBASIC1.53□□□□□ -2.16
PRKNO60260 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC1.53□□□□□ -2.16
PRKNO60260 AC022559.1-201ENST00000520905 205 ntBASIC1.53□□□□□ -2.16
PRKNO60260 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKNO60260 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.53□□□□□ -2.16
PRKNO60260 AC022254.1-201ENST00000567857 235 ntBASIC1.53□□□□□ -2.16
PRKNO60260 JPX_2.1-201ENST00000614161 69 ntBASIC1.53□□□□□ -2.16
PRKNO60260 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.53□□□□□ -2.17
PRKNO60260 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
PRKNO60260 Y_RNA.4-201ENST00000362333 112 ntBASIC1.52□□□□□ -2.17
PRKNO60260 Y_RNA.150-201ENST00000363562 102 ntBASIC1.52□□□□□ -2.17
PRKNO60260 RNU6-682P-201ENST00000363843 106 ntBASIC1.52□□□□□ -2.17
PRKNO60260 RNU6-457P-201ENST00000363999 107 ntBASIC1.52□□□□□ -2.17
PRKNO60260 Y_RNA.796-201ENST00000364268 102 ntBASIC1.52□□□□□ -2.17
PRKNO60260 Y_RNA.799-201ENST00000364992 102 ntBASIC1.52□□□□□ -2.17
PRKNO60260 RNA5SP363-201ENST00000365072 115 ntBASIC1.52□□□□□ -2.17
PRKNO60260 Y_RNA.435-201ENST00000384095 112 ntBASIC1.52□□□□□ -2.17
PRKNO60260 RNU6-439P-201ENST00000384188 106 ntBASIC1.52□□□□□ -2.17
PRKNO60260 RNU6-1031P-201ENST00000384773 107 ntBASIC1.52□□□□□ -2.17
PRKNO60260 SNORA12.1-201ENST00000390873 148 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms