Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 RNA5SP484-201ENST00000458857 111 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 RNU6-830P-201ENST00000516353 107 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 Y_RNA.697-201ENST00000516776 113 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 RNU7-161P-201ENST00000517289 62 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 AC024405.2-202ENST00000532731 184 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.26□□□□□ -2.61
SSSCA1O60232 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC-1.26□□□□□ -2.61
SSSCA1O60232 AC090616.2-202ENST00000584248 222 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 AC138207.3-201ENST00000585289 166 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 AL049777.1-201ENST00000622740 518 ntBASIC-1.26□□□□□ -2.61
SSSCA1O60232 SNORD115-42-201ENST00000364273 82 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 RNU6-1082P-201ENST00000364574 107 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 RNU6-865P-201ENST00000364772 107 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 Y_RNA.494-201ENST00000384432 111 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 MIR518B-201ENST00000385127 83 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 RNU6-913P-201ENST00000390913 95 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 RNU6-847P-201ENST00000411115 108 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 AL008987.1-201ENST00000415528 237 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 AL031667.1-201ENST00000440222 725 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 AP000533.3-201ENST00000447704 118 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.27□□□□□ -2.61
SSSCA1O60232 RNU6-175P-201ENST00000516896 107 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 MIR5591-201ENST00000578248 65 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 AC112487.2-201ENST00000637950 304 ntBASIC-1.27□□□□□ -2.61
SSSCA1O60232 Y_RNA.38-201ENST00000362617 102 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-1309P-201ENST00000363305 108 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-324P-201ENST00000363957 106 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-702P-201ENST00000364982 107 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 SNORD38C-201ENST00000384381 69 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 MTCYBP4-201ENST00000401524 249 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-757P-201ENST00000410334 100 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-602P-201ENST00000411155 105 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 AC073464.1-201ENST00000429823 534 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 UQCRBP2-201ENST00000447827 297 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU7-134P-201ENST00000458997 64 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-765P-201ENST00000516916 99 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNU6-158P-201ENST00000517104 100 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 AP005530.1-201ENST00000572608 567 ntTSL 3 BASIC-1.28□□□□□ -2.61
SSSCA1O60232 MIR4491-201ENST00000581087 68 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 AC079466.2-201ENST00000585394 185 ntTSL 5 BASIC-1.28□□□□□ -2.61
SSSCA1O60232 AL158050.2-201ENST00000605336 568 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 MIR8055-201ENST00000610739 97 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 MIR6129-201ENST00000616087 109 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 AL121895.2-201ENST00000619558 447 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-1.28□□□□□ -2.61
SSSCA1O60232 MIR1246-201ENST00000636535 73 ntBASIC-1.28□□□□□ -2.61
SSSCA1O60232 RNY1P12-201ENST00000364251 105 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 Y_RNA.497-201ENST00000384447 98 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 SNORD116-12-201ENST00000384468 92 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 U8.15-201ENST00000390947 134 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC-1.29□□□□□ -2.62
SSSCA1O60232 USP9YP12-201ENST00000450481 570 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 RNU2-11P-201ENST00000459191 187 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 HAR1A.1-201ENST00000459583 118 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AC011352.1-201ENST00000512300 793 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 RNU6-751P-201ENST00000516382 101 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 OSBPL9P5-201ENST00000542581 171 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-1.29□□□□□ -2.62
SSSCA1O60232 MTCO3P23-201ENST00000561363 289 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC-1.29□□□□□ -2.62
SSSCA1O60232 MIR3684-201ENST00000579779 74 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AP000942.4-201ENST00000604811 241 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AL136370.1-201ENST00000608166 691 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 AP002371.2-201ENST00000624450 503 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 Z97988.1-201ENST00000637697 135 ntBASIC-1.29□□□□□ -2.62
SSSCA1O60232 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 Y_RNA.367-201ENST00000365544 101 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 SNORD116.1-201ENST00000365628 92 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 Y_RNA.442-201ENST00000384131 102 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 RNU6-533P-201ENST00000384144 107 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 RNU6-131P-201ENST00000391144 107 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-1.3□□□□□ -2.62
SSSCA1O60232 MIR1285-2-201ENST00000408311 88 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 FCF1P4-201ENST00000448326 183 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 Y_RNA.637-201ENST00000459424 114 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 AC107027.2-201ENST00000512197 115 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-1.3□□□□□ -2.62
SSSCA1O60232 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC-1.3□□□□□ -2.62
SSSCA1O60232 AL354950.2-201ENST00000617939 290 ntBASIC-1.3□□□□□ -2.62
SSSCA1O60232 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 Y_RNA.329-201ENST00000365209 107 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 SNORA24-201ENST00000384096 131 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 RNU6-900P-201ENST00000384498 102 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 SNORD41.1-201ENST00000391000 69 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 MTATP6P14-201ENST00000455189 673 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 RNU7-104P-201ENST00000459398 79 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-1.31□□□□□ -2.62
SSSCA1O60232 RNA5SP476-201ENST00000516613 103 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 AL158209.2-201ENST00000619266 216 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 AC099654.12-201ENST00000639868 649 ntBASIC-1.31□□□□□ -2.62
SSSCA1O60232 SNORA72.6-201ENST00000384520 129 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 RNU6-901P-201ENST00000384593 106 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 RNU6ATAC42P-201ENST00000408637 95 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 SNX3P1X-201ENST00000414887 175 ntBASIC-1.32□□□□□ -2.62
SSSCA1O60232 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC-1.32□□□□□ -2.62
SSSCA1O60232 RNU6-479P-201ENST00000516348 105 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms