Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 snoU13.27-201ENST00000459278 104 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 RNA5SP57-201ENST00000459463 123 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 AC074198.2-201ENST00000508153 258 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 RNU6-1007P-201ENST00000516586 107 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 RNU6-1116P-201ENST00000517269 99 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 MIR4744-201ENST00000581563 82 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 MIR2681-201ENST00000581814 105 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 AC072026.1-201ENST00000605023 201 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 AC108706.1-201ENST00000611053 297 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 AC021506.2-201ENST00000612354 169 ntBASIC1.68□□□□□ -2.14
ITM2AO43736 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.68□□□□□ -2.14
ITM2AO43736 SNORD68-201ENST00000363214 84 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 Y_RNA.182-201ENST00000363880 111 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 SNORD50B-201ENST00000364995 70 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 RNU6-578P-201ENST00000390980 103 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 U8.16-201ENST00000391279 133 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 MIR548I3-201ENST00000408378 149 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 MIR548I1-201ENST00000408810 149 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 RN7SKP200-201ENST00000410564 320 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 AC244636.1-201ENST00000421152 228 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.67□□□□□ -2.14
ITM2AO43736 SNRPGP8-201ENST00000454064 226 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 RNU7-28P-201ENST00000516759 62 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 MIR4299-201ENST00000577899 72 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 uc_338.4-201ENST00000616635 176 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.67□□□□□ -2.14
ITM2AO43736 AC095038.3-201ENST00000634439 195 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 AP006437.1-201ENST00000641440 3685 ntBASIC1.67□□□□□ -2.14
ITM2AO43736 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
ITM2AO43736 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC1.66□□□□□ -2.14
ITM2AO43736 RNU6-103P-201ENST00000363686 107 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNU6-203P-201ENST00000384038 104 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNU6-886P-201ENST00000384319 105 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNU4-70P-201ENST00000384579 139 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
ITM2AO43736 RNU6-360P-201ENST00000390944 104 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 SNORD72-201ENST00000390994 80 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNU6-1228P-201ENST00000391014 107 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 MLLT10P1-201ENST00000418346 262 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.66□□□□□ -2.14
ITM2AO43736 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC1.66□□□□□ -2.14
ITM2AO43736 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC1.66□□□□□ -2.14
ITM2AO43736 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.66□□□□□ -2.14
ITM2AO43736 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
ITM2AO43736 SNORD77.4-201ENST00000516158 81 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNA5SP168-201ENST00000516642 112 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 RNA5SP481-201ENST00000516814 122 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC1.66□□□□□ -2.14
ITM2AO43736 AC109810.1-201ENST00000534066 224 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 MIR4709-201ENST00000577272 72 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AC098479.1-201ENST00000609225 154 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 JPX_2.1-201ENST00000614161 69 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AL590808.1-201ENST00000618696 141 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AC064859.1-201ENST00000624741 174 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 AC008555.8-201ENST00000623602 2168 ntBASIC1.66□□□□□ -2.14
ITM2AO43736 MIR449A-201ENST00000362113 91 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 Y_RNA.75-201ENST00000362927 97 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 Y_RNA.240-201ENST00000364469 95 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 RNU6-275P-201ENST00000364910 107 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 RNU6-484P-201ENST00000384016 107 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 RNU6-424P-201ENST00000384367 105 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 RNU5E-9P-201ENST00000411164 104 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC1.65□□□□□ -2.15
ITM2AO43736 RNU7-34P-201ENST00000459394 64 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.65□□□□□ -2.15
ITM2AO43736 Y_RNA.797-201ENST00000515977 94 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 RNU7-149P-201ENST00000516739 59 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 MRPS18CP4-201ENST00000535821 231 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.65□□□□□ -2.15
ITM2AO43736 MIR4287-201ENST00000579398 78 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 AC008507.4-201ENST00000585464 127 ntBASIC1.65□□□□□ -2.15
ITM2AO43736 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.15
ITM2AO43736 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.64□□□□□ -2.15
ITM2AO43736 RNY3P5-201ENST00000384127 102 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 RNU6-950P-201ENST00000384651 107 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 MIR194-1-201ENST00000384892 85 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 AL034345.1-201ENST00000407768 123 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 Y_RNA.622-201ENST00000411091 108 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 AL161935.2-201ENST00000414627 60 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 MRPS17P9-201ENST00000511924 393 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC1.64□□□□□ -2.15
ITM2AO43736 SNORA28-201ENST00000606769 126 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 AC103810.8-201ENST00000607347 118 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.64□□□□□ -2.15
ITM2AO43736 SNORD45.3-201ENST00000363836 72 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 Y_RNA.555-201ENST00000384673 110 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 MIR676-201ENST00000390702 67 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 RNU6-131P-201ENST00000391144 107 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 AC114811.1-201ENST00000507207 168 ntBASIC1.63□□□□□ -2.15
ITM2AO43736 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC1.63□□□□□ -2.15
ITM2AO43736 RNU6-1138P-201ENST00000365359 106 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 Y_RNA.486-201ENST00000384398 107 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 AC019129.1-201ENST00000403786 261 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 RN7SKP192-201ENST00000411291 327 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 SNRPGP14-201ENST00000435400 219 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 SNORD45.4-201ENST00000516629 73 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 MIR4713-201ENST00000582691 75 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 AC120024.3-201ENST00000603167 156 ntBASIC1.62□□□□□ -2.15
ITM2AO43736 AC092881.1-201ENST00000638218 2733 ntBASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms