Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 MIR2355-201ENST00000517199 87 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 MIR3908-201ENST00000579798 126 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 AC008608.1-201ENST00000603910 127 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 JPX_2.1-201ENST00000614161 69 ntBASIC-0.26□□□□□ -2.45
SGCEO43556 RNU6-756P-201ENST00000383997 107 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU6-483P-201ENST00000384088 108 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 BTF3P11-201ENST00000426582 477 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.27□□□□□ -2.45
SGCEO43556 RNU2-13P-201ENST00000515909 113 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU7-116P-201ENST00000516940 62 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU7-156P-201ENST00000517214 74 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC-0.27□□□□□ -2.45
SGCEO43556 AC006362.1-201ENST00000567392 174 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.27□□□□□ -2.45
SGCEO43556 SNORD92-201ENST00000585078 85 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 AC092447.9-201ENST00000603395 144 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 AL355297.3-201ENST00000604082 446 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 AC005014.2-201ENST00000607795 599 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 MIR6128-201ENST00000615528 109 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 MIR2909-201ENST00000617113 69 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 MIR1295B-201ENST00000636144 60 ntBASIC-0.27□□□□□ -2.45
SGCEO43556 RNU6-874P-201ENST00000362390 105 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-923P-201ENST00000364753 107 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-259P-201ENST00000383999 107 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-127P-201ENST00000390897 107 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MIR548H2-201ENST00000408874 88 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-855P-201ENST00000410395 104 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MTND2P9-201ENST00000422293 931 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MTND2P22-201ENST00000444325 1033 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 AC010424.1-201ENST00000506336 297 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-448P-201ENST00000517052 107 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MIR4743-201ENST00000584576 69 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MIR3942-201ENST00000585264 109 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 uc_338.6-201ENST00000613544 171 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 MIR7111-201ENST00000619751 72 ntBASIC-0.28□□□□□ -2.45
SGCEO43556 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 RNY3P3-201ENST00000363816 102 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 RNU6-929P-201ENST00000384429 107 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 MIR214-201ENST00000385214 110 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.29□□□□□ -2.46
SGCEO43556 DEFB108C-201ENST00000400154 252 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 MIR1257-201ENST00000408490 117 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 AC005042.3-201ENST00000453230 174 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 AC107297.1-201ENST00000459991 176 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 RNU6-864P-201ENST00000516256 108 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 AC133485.4-201ENST00000561835 220 ntBASIC-0.29□□□□□ -2.46
SGCEO43556 RNU6-451P-201ENST00000362921 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 Y_RNA.362-201ENST00000365518 110 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 MIR593-201ENST00000384856 100 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 AC074085.1-201ENST00000413598 418 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 MTND1P17-201ENST00000448961 204 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU7-185P-201ENST00000459215 60 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC-0.3□□□□□ -2.46
SGCEO43556 AC019235.1-201ENST00000503847 207 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-848P-201ENST00000515948 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-617P-201ENST00000516147 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-473P-201ENST00000516164 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-469P-201ENST00000516253 101 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-1049P-201ENST00000516414 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 RNU6-1007P-201ENST00000516586 107 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 AC098679.4-201ENST00000624241 654 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 AC090582.1-201ENST00000636321 199 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 MIR3662-201ENST00000637030 95 ntBASIC-0.3□□□□□ -2.46
SGCEO43556 U8.7-201ENST00000364940 136 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 RNU6-767P-201ENST00000384132 107 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 SNORD38B-201ENST00000384690 67 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 RNU6-373P-201ENST00000411247 98 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 AC011352.1-201ENST00000512300 793 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 RNU6-566P-201ENST00000516790 107 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 RNU6-273P-201ENST00000516937 96 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 AC018638.8-201ENST00000588755 281 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC-0.31□□□□□ -2.46
SGCEO43556 MIR8064-201ENST00000612863 90 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 AC067863.3-201ENST00000624172 122 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 SNORD38B-202ENST00000625943 69 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 AC010332.2-201ENST00000613083 1904 ntBASIC-0.31□□□□□ -2.46
SGCEO43556 Y_RNA.77-201ENST00000362962 107 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNA5SP325-201ENST00000363756 130 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNU6-1119P-201ENST00000384349 108 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 MIR643-201ENST00000385267 97 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 MIR892B-201ENST00000401279 77 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNU6-710P-201ENST00000410424 105 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNA5SP127-201ENST00000411051 133 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 AC069271.1-201ENST00000445577 156 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 TRBVB-201ENST00000477100 408 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 AC091959.1-201ENST00000495857 238 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 RNU6-320P-201ENST00000516511 106 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 Y_RNA.704-201ENST00000516851 102 ntBASIC-0.32□□□□□ -2.46
SGCEO43556 AC006441.5-201ENST00000612680 209 ntBASIC-0.32□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 116.9 ms