Protein–RNA interactions for Protein: O43542

XRCC3, DNA repair protein XRCC3, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3O43542 AC013791.1-201ENST00000616619 62 ntBASIC1.3□□□□□ -2.2
XRCC3O43542 Y_RNA.269-201ENST00000364685 89 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 Y_RNA.376-201ENST00000365638 108 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 SNORD26-201ENST00000384147 75 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 Y_RNA.512-201ENST00000384518 102 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 MIR452-201ENST00000385020 85 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 SNORD41-201ENST00000386967 70 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 AL451046.2-201ENST00000403074 277 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 HMGN2P32-201ENST00000444648 269 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 TRBVB-201ENST00000477100 408 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 RNU6-165P-201ENST00000517170 99 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 AL117187.1-201ENST00000555482 181 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 AC087685.1-201ENST00000587507 141 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
XRCC3O43542 snoU13.31-201ENST00000607291 104 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 MIR7974-201ENST00000615835 79 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 AP001282.2-201ENST00000616149 309 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 AC007742.2-201ENST00000618226 398 ntBASIC1.29□□□□□ -2.2
XRCC3O43542 RNU6-1205P-201ENST00000363625 106 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 RNU6-662P-201ENST00000384253 104 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 Y_RNA.574-201ENST00000384766 95 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 SNORA17.3-201ENST00000391159 129 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 AL627390.1-201ENST00000396055 340 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 MIR1298-201ENST00000408783 112 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC3O43542 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC3O43542 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.28□□□□□ -2.2
XRCC3O43542 RN7SKP88-201ENST00000516847 250 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 DEFB108E-201ENST00000524692 240 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 AC007450.1-201ENST00000536492 188 ntTSL 3 BASIC1.28□□□□□ -2.2
XRCC3O43542 MIR5692C2-201ENST00000577959 77 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 AC136443.5-201ENST00000603741 370 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 BX248123.2-201ENST00000606318 124 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 7SK.8-201ENST00000612110 250 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 7SK.11-201ENST00000615477 250 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 MIR8062-201ENST00000621515 85 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 7SK.13-201ENST00000622040 250 ntBASIC1.28□□□□□ -2.2
XRCC3O43542 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.27□□□□□ -2.21
XRCC3O43542 AL442644.1-201ENST00000454390 3105 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 MIR335-201ENST00000362173 94 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 Y_RNA.118-201ENST00000363300 101 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 RNU6-238P-201ENST00000363313 106 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 Y_RNA.336-201ENST00000365307 109 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 BTF3P4-201ENST00000418852 495 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 BTF3P11-201ENST00000426582 477 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 RNU1-98P-201ENST00000458992 160 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 NDUFA4P2-201ENST00000489989 244 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.27□□□□□ -2.21
XRCC3O43542 SCARNA24.2-201ENST00000516968 130 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 AL161670.1-201ENST00000554348 137 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 RPL23AP91-201ENST00000569211 455 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 FAM106DP-201ENST00000586416 501 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.27□□□□□ -2.21
XRCC3O43542 Y_RNA.176-201ENST00000363815 109 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 Y_RNA.237-201ENST00000364439 102 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 MIR1278-201ENST00000408753 81 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 AC008269.2-201ENST00000561915 1105 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 AL357312.1-201ENST00000603879 298 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 AL360085.1-201ENST00000604713 532 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 MIR8065-201ENST00000620577 100 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 snoU18.1-201ENST00000629629 71 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 U6.104-201ENST00000637979 90 ntBASIC1.26□□□□□ -2.21
XRCC3O43542 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
XRCC3O43542 AL391987.6-201ENST00000305671 199 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 Y_RNA.275-201ENST00000364726 110 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 Y_RNA.459-201ENST00000384251 102 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 Y_RNA.518-201ENST00000384552 113 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 MIR517C-201ENST00000385103 95 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 MT-TW-201ENST00000387382 68 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 MIR1302-6-201ENST00000408466 90 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 AL358176.2-201ENST00000425769 204 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 RPS29P23-201ENST00000458635 123 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 SNORD11-201ENST00000459124 84 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 TRMT112P2-201ENST00000512910 132 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 SCARNA15.1-201ENST00000516384 125 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 RNA5SP61-201ENST00000516453 100 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 RNU6-1007P-201ENST00000516586 107 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 AL008718.3-201ENST00000610217 321 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 MIR7111-201ENST00000619751 72 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 AC068700.1-201ENST00000565862 3754 ntBASIC1.25□□□□□ -2.21
XRCC3O43542 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
XRCC3O43542 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
XRCC3O43542 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
XRCC3O43542 SNORD14E-201ENST00000364009 85 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 MIR136-201ENST00000385207 82 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 RNU4-62P-201ENST00000410125 130 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 RNU6-955P-201ENST00000410497 104 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 AC015922.2-201ENST00000435593 184 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 AC090142.3-201ENST00000519012 385 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.24□□□□□ -2.21
XRCC3O43542 AC008507.4-201ENST00000585464 127 ntBASIC1.24□□□□□ -2.21
XRCC3O43542 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
XRCC3O43542 Y_RNA.44-201ENST00000362676 108 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 Y_RNA.461-201ENST00000384263 103 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 RNU6-472P-201ENST00000384299 107 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 Y_RNA.483-201ENST00000384380 101 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 RNU6-1054P-201ENST00000411293 104 ntBASIC1.23□□□□□ -2.21
XRCC3O43542 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.23□□□□□ -2.21
XRCC3O43542 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.23□□□□□ -2.21
XRCC3O43542 AC005840.1-201ENST00000498412 377 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 109.9 ms