Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 OR2A41P-201ENST00000473586 105 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 SNORD79.1-201ENST00000516069 84 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.38□□□□□ -2.19
NPHP1O15259 POLR3GP1-201ENST00000594073 261 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.38□□□□□ -2.19
NPHP1O15259 RNU6-1084P-201ENST00000362498 107 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 Y_RNA.36-201ENST00000362602 112 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 Y_RNA.128-201ENST00000363391 112 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 Y_RNA.424-201ENST00000384063 103 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 SNORD12-201ENST00000391002 90 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 RNU6-131P-201ENST00000391144 107 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.37□□□□□ -2.19
NPHP1O15259 AC024405.2-202ENST00000532731 184 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
NPHP1O15259 AC134503.1-201ENST00000633048 54 ntBASIC1.37□□□□□ -2.19
NPHP1O15259 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
NPHP1O15259 Y_RNA.138-201ENST00000363462 102 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 SNORD50B-201ENST00000364995 70 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 snoU2-30.1-201ENST00000365012 70 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 MIR516B2-201ENST00000385190 85 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 snoU13.25-201ENST00000458945 104 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 AC090142.3-201ENST00000519012 385 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC1.36□□□□□ -2.19
NPHP1O15259 MIR3192-201ENST00000584920 77 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 AC104695.3-201ENST00000604052 296 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC1.36□□□□□ -2.19
NPHP1O15259 PVT1_3.1-201ENST00000620853 95 ntBASIC1.36□□□□□ -2.19
NPHP1O15259 SNORD114-26-201ENST00000363543 72 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 RNU6-342P-201ENST00000384521 104 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AC063976.4-201ENST00000421971 163 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AC117454.1-201ENST00000491120 168 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 RN7SKP179-201ENST00000516126 217 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 RNU7-115P-201ENST00000516433 55 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AC127455.1-201ENST00000565496 145 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AC136932.1-201ENST00000574771 208 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AC124312.5-201ENST00000604451 268 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 AL391903.3-201ENST00000612158 163 ntBASIC1.35□□□□□ -2.19
NPHP1O15259 MGAT4C-209ENST00000611864 25116 ntAPPRIS P1 TSL 5 BASIC1.34□□□□□ -2.19
NPHP1O15259 SNORA63.7-201ENST00000365579 123 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 Y_RNA.383-201ENST00000383855 97 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 MIR136-201ENST00000385207 82 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 RNU6-823P-201ENST00000391042 103 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 HMGN2P32-201ENST00000444648 269 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 RPS26P48-201ENST00000491713 339 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 Y_RNA.711-201ENST00000516993 102 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 Y_RNA.714-201ENST00000517065 90 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 RNU6-988P-201ENST00000519081 107 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 PRELID3BP2-201ENST00000605362 201 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 SNORD113-5-201ENST00000607261 78 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 MIR548AY-201ENST00000617669 107 ntBASIC1.34□□□□□ -2.19
NPHP1O15259 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.34□□□□□ -2.19
NPHP1O15259 Y_RNA.203-201ENST00000364106 102 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 Y_RNA.286-201ENST00000364813 102 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 U8.7-201ENST00000364940 136 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 SNORA22B-201ENST00000383876 138 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 SNORA80D-201ENST00000384488 135 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 MTCO2P12-201ENST00000427426 682 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 AC002429.1-201ENST00000437672 148 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 AC245047.8-201ENST00000456455 284 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 SEPT14P8-201ENST00000508026 178 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 RNU6-1046P-201ENST00000516538 107 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 Y_RNA.715-201ENST00000517082 110 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 SNORA74.3-201ENST00000517108 154 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 AC211469.2-201ENST00000605461 205 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 MIR6779-201ENST00000617283 64 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 AL442644.1-201ENST00000454390 3105 ntBASIC1.33□□□□□ -2.2
NPHP1O15259 RNU6-450P-201ENST00000364654 107 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 RNU6-969P-201ENST00000383900 105 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 MIR548P-201ENST00000408336 84 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 MIR1285-1-201ENST00000408593 84 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 AL591704.2-201ENST00000421658 181 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 POLR2KP2-201ENST00000438155 177 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 RPL23AP54-201ENST00000495129 419 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 AL391516.1-201ENST00000554380 2449 ntBASIC1.32□□□□□ -2.2
NPHP1O15259 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.32□□□□□ -2.2
NPHP1O15259 RNU4-80P-201ENST00000363200 141 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 MIR15B-201ENST00000385045 98 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 MIR1252-201ENST00000408861 65 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP1O15259 Y_RNA.721-201ENST00000517207 102 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 AC020661.2-201ENST00000560114 134 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.31□□□□□ -2.2
NPHP1O15259 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP1O15259 RAC1P9-201ENST00000604990 392 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 SNORD114-21-201ENST00000606412 72 ntBASIC1.31□□□□□ -2.2
NPHP1O15259 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP1O15259 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC1.31□□□□□ -2.2
NPHP1O15259 Y_RNA.183-201ENST00000363882 113 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 Y_RNA.222-201ENST00000364264 102 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 Y_RNA.389-201ENST00000383924 113 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 RNU6-101P-201ENST00000410323 104 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 RNU6-397P-201ENST00000516226 104 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 RNU6-897P-201ENST00000517135 105 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 MIR4300-201ENST00000581016 96 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 MIR3171-201ENST00000584270 74 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 HSPE1P19-201ENST00000603327 295 ntBASIC1.3□□□□□ -2.2
NPHP1O15259 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.3□□□□□ -2.2
NPHP1O15259 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.29□□□□□ -2.2
NPHP1O15259 Y_RNA.216-201ENST00000364205 93 ntBASIC1.29□□□□□ -2.2
NPHP1O15259 SNORD115-46-201ENST00000390982 71 ntBASIC1.29□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms