Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 RNU6-899P-201ENST00000363947 107 ntBASIC1.2□□□□□ -2.22
RTCAO00442 Y_RNA.203-201ENST00000364106 102 ntBASIC1.2□□□□□ -2.22
RTCAO00442 SNORA63C-201ENST00000364578 129 ntBASIC1.2□□□□□ -2.22
RTCAO00442 RNU6-806P-201ENST00000365147 105 ntBASIC1.2□□□□□ -2.22
RTCAO00442 RNU6-144P-201ENST00000383951 107 ntBASIC1.2□□□□□ -2.22
RTCAO00442 SNORA26.5-201ENST00000391215 123 ntBASIC1.2□□□□□ -2.22
RTCAO00442 MIR548F4-201ENST00000408515 105 ntBASIC1.2□□□□□ -2.22
RTCAO00442 RNU6-1203P-201ENST00000410703 110 ntBASIC1.2□□□□□ -2.22
RTCAO00442 RNU7-141P-201ENST00000459304 62 ntBASIC1.2□□□□□ -2.22
RTCAO00442 RNU6-917P-201ENST00000516294 104 ntBASIC1.2□□□□□ -2.22
RTCAO00442 Y_RNA.714-201ENST00000517065 90 ntBASIC1.2□□□□□ -2.22
RTCAO00442 Y_RNA.720-201ENST00000517166 92 ntBASIC1.2□□□□□ -2.22
RTCAO00442 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.2□□□□□ -2.22
RTCAO00442 MIR2681-201ENST00000581814 105 ntBASIC1.2□□□□□ -2.22
RTCAO00442 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
RTCAO00442 AC037487.3-201ENST00000606668 112 ntBASIC1.2□□□□□ -2.22
RTCAO00442 AC007742.2-201ENST00000618226 398 ntBASIC1.2□□□□□ -2.22
RTCAO00442 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
RTCAO00442 Y_RNA.26-201ENST00000362539 101 ntBASIC1.19□□□□□ -2.22
RTCAO00442 Y_RNA.64-201ENST00000362845 102 ntBASIC1.19□□□□□ -2.22
RTCAO00442 Y_RNA.217-201ENST00000364214 105 ntBASIC1.19□□□□□ -2.22
RTCAO00442 RNU6-738P-201ENST00000384531 106 ntBASIC1.19□□□□□ -2.22
RTCAO00442 MIR215-201ENST00000384858 110 ntBASIC1.19□□□□□ -2.22
RTCAO00442 SNORD41-201ENST00000386967 70 ntBASIC1.19□□□□□ -2.22
RTCAO00442 Y_RNA.621-201ENST00000411065 96 ntBASIC1.19□□□□□ -2.22
RTCAO00442 AC113618.1-201ENST00000416747 285 ntBASIC1.19□□□□□ -2.22
RTCAO00442 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC1.19□□□□□ -2.22
RTCAO00442 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.19□□□□□ -2.22
RTCAO00442 RNU6-437P-201ENST00000459408 95 ntBASIC1.19□□□□□ -2.22
RTCAO00442 Y_RNA.641-201ENST00000459414 105 ntBASIC1.19□□□□□ -2.22
RTCAO00442 AC117454.1-201ENST00000491120 168 ntBASIC1.19□□□□□ -2.22
RTCAO00442 RNU6-322P-201ENST00000516010 103 ntBASIC1.19□□□□□ -2.22
RTCAO00442 SNORA27.4-201ENST00000516650 95 ntBASIC1.19□□□□□ -2.22
RTCAO00442 AC090821.2-201ENST00000523552 176 ntBASIC1.19□□□□□ -2.22
RTCAO00442 MIR4778-201ENST00000577635 80 ntBASIC1.19□□□□□ -2.22
RTCAO00442 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.19□□□□□ -2.22
RTCAO00442 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
RTCAO00442 RNU6-1272P-201ENST00000362776 107 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SNORD68-201ENST00000363214 84 ntBASIC1.18□□□□□ -2.22
RTCAO00442 MIR452-201ENST00000385020 85 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SNORA36B-201ENST00000410438 131 ntBASIC1.18□□□□□ -2.22
RTCAO00442 RNU2-14P-201ENST00000411053 191 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SNRPGP10-201ENST00000432323 225 ntBASIC1.18□□□□□ -2.22
RTCAO00442 HMGN2P32-201ENST00000444648 269 ntBASIC1.18□□□□□ -2.22
RTCAO00442 Y_RNA.637-201ENST00000459424 114 ntBASIC1.18□□□□□ -2.22
RTCAO00442 RPL23AP54-201ENST00000495129 419 ntBASIC1.18□□□□□ -2.22
RTCAO00442 AC091959.1-201ENST00000495857 238 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SERF1AP1-201ENST00000514575 187 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SNORA31.4-201ENST00000516049 129 ntBASIC1.18□□□□□ -2.22
RTCAO00442 SNORA70.22-201ENST00000517160 124 ntBASIC1.18□□□□□ -2.22
RTCAO00442 MIR5688-201ENST00000580619 83 ntBASIC1.18□□□□□ -2.22
RTCAO00442 AC005357.1-201ENST00000588399 301 ntBASIC1.18□□□□□ -2.22
RTCAO00442 GHRLOS.1-201ENST00000610995 70 ntBASIC1.18□□□□□ -2.22
RTCAO00442 AL157834.3-201ENST00000615543 103 ntBASIC1.18□□□□□ -2.22
RTCAO00442 LINC01068-202ENST00000620874 626 ntTSL 3 BASIC1.18□□□□□ -2.22
RTCAO00442 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC1.18□□□□□ -2.22
RTCAO00442 MIR335-201ENST00000362173 94 ntBASIC1.17□□□□□ -2.22
RTCAO00442 SNORA25.1-201ENST00000362326 128 ntBASIC1.17□□□□□ -2.22
RTCAO00442 Y_RNA.796-201ENST00000364268 102 ntBASIC1.17□□□□□ -2.22
RTCAO00442 Y_RNA.799-201ENST00000364992 102 ntBASIC1.17□□□□□ -2.22
RTCAO00442 Y_RNA.336-201ENST00000365307 109 ntBASIC1.17□□□□□ -2.22
RTCAO00442 RNU6-163P-201ENST00000384396 106 ntBASIC1.17□□□□□ -2.22
RTCAO00442 MIR606-201ENST00000384851 96 ntBASIC1.17□□□□□ -2.22
RTCAO00442 RNU6-763P-201ENST00000390865 106 ntBASIC1.17□□□□□ -2.22
RTCAO00442 MTND5P22-201ENST00000458380 195 ntBASIC1.17□□□□□ -2.22
RTCAO00442 AC114811.1-201ENST00000507207 168 ntBASIC1.17□□□□□ -2.22
RTCAO00442 AL512605.2-201ENST00000592972 256 ntBASIC1.17□□□□□ -2.22
RTCAO00442 AL357312.1-201ENST00000603879 298 ntBASIC1.17□□□□□ -2.22
RTCAO00442 AC013791.1-201ENST00000616619 62 ntBASIC1.17□□□□□ -2.22
RTCAO00442 AL353770.2-201ENST00000620024 78 ntBASIC1.17□□□□□ -2.22
RTCAO00442 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-1209P-201ENST00000363655 107 ntBASIC1.16□□□□□ -2.22
RTCAO00442 Y_RNA.242-201ENST00000364473 110 ntBASIC1.16□□□□□ -2.22
RTCAO00442 snoU2-30.1-201ENST00000365012 70 ntBASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-514P-201ENST00000384208 107 ntBASIC1.16□□□□□ -2.22
RTCAO00442 MIR526A1-201ENST00000384897 85 ntBASIC1.16□□□□□ -2.22
RTCAO00442 SNORD12-201ENST00000391002 90 ntBASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-131P-201ENST00000391144 107 ntBASIC1.16□□□□□ -2.22
RTCAO00442 AL451046.2-201ENST00000403074 277 ntBASIC1.16□□□□□ -2.22
RTCAO00442 DYNLT3P2-201ENST00000442517 295 ntBASIC1.16□□□□□ -2.22
RTCAO00442 AC093850.1-201ENST00000454121 251 ntBASIC1.16□□□□□ -2.22
RTCAO00442 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.16□□□□□ -2.22
RTCAO00442 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.16□□□□□ -2.22
RTCAO00442 UBL5P1-201ENST00000507979 193 ntBASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-1338P-201ENST00000516328 91 ntBASIC1.16□□□□□ -2.22
RTCAO00442 SNORD45.4-201ENST00000516629 73 ntBASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-165P-201ENST00000517170 99 ntBASIC1.16□□□□□ -2.22
RTCAO00442 RNU6-1116P-201ENST00000517269 99 ntBASIC1.16□□□□□ -2.22
RTCAO00442 AL117187.1-201ENST00000555482 181 ntBASIC1.16□□□□□ -2.22
RTCAO00442 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.16□□□□□ -2.22
RTCAO00442 AC106754.2-201ENST00000623006 233 ntBASIC1.16□□□□□ -2.22
RTCAO00442 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
RTCAO00442 MIR15B-201ENST00000385045 98 ntBASIC1.15□□□□□ -2.23
RTCAO00442 RNU6-1054P-201ENST00000411293 104 ntBASIC1.15□□□□□ -2.23
RTCAO00442 RNA5SP458-201ENST00000516188 119 ntBASIC1.15□□□□□ -2.23
RTCAO00442 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
RTCAO00442 AP001282.2-201ENST00000616149 309 ntBASIC1.15□□□□□ -2.23
RTCAO00442 MIR8062-201ENST00000621515 85 ntBASIC1.15□□□□□ -2.23
RTCAO00442 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.14□□□□□ -2.23
RTCAO00442 RNU6-1048P-201ENST00000364054 107 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms