Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 HMGN1P10-201ENST00000474557 553 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 RNU6-470P-201ENST00000515954 104 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 RNU6-830P-201ENST00000516353 107 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 AC048344.4-201ENST00000619744 527 ntBASIC0.13□□□□□ -2.39
UPK1AO00322 Y_RNA.203-201ENST00000364106 102 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 RNY1-201ENST00000364228 113 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 RNU6-580P-201ENST00000365159 107 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 Y_RNA.341-201ENST00000365341 102 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 Y_RNA.577-201ENST00000384794 101 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 SNORD115-47-201ENST00000391226 86 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 RNU6-1156P-201ENST00000410365 100 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC0.12□□□□□ -2.39
UPK1AO00322 RPS29P25-201ENST00000481709 171 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 RPL23AP54-201ENST00000495129 419 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC0.12□□□□□ -2.39
UPK1AO00322 RNU7-181P-201ENST00000517234 74 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 AC144568.1-201ENST00000520139 137 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 AC022523.2-201ENST00000561045 150 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 MIR4264-201ENST00000583520 66 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0.12□□□□□ -2.39
UPK1AO00322 uc_338.4-201ENST00000616635 176 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 U4.5-201ENST00000617137 123 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 AC087588.2-201ENST00000617667 426 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 MTND1P7-201ENST00000632801 297 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 MIR924-201ENST00000638017 53 ntBASIC0.12□□□□□ -2.39
UPK1AO00322 MIR103A1-201ENST00000362165 78 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.86-201ENST00000363020 111 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.88-201ENST00000363029 99 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNA5SP62-201ENST00000363457 110 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.796-201ENST00000364268 102 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.230-201ENST00000364348 109 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.799-201ENST00000364992 102 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.329-201ENST00000365209 107 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNY3P4-201ENST00000384428 101 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNU6ATAC6P-201ENST00000408132 126 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 SNORA40.8-201ENST00000411034 126 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNU6-847P-201ENST00000411115 108 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNU6-1199P-201ENST00000411249 104 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 AC015818.7-201ENST00000428754 109 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 AC087499.7-201ENST00000441958 109 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC0.11□□□□□ -2.39
UPK1AO00322 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.11□□□□□ -2.39
UPK1AO00322 snoU13.18-201ENST00000459483 104 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RNU6-1007P-201ENST00000516586 107 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 MIR4804-201ENST00000581683 73 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 RBM11P1-201ENST00000604951 799 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 uc_338.16-201ENST00000621804 95 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 MIR3688-2-201ENST00000636963 87 ntBASIC0.11□□□□□ -2.39
UPK1AO00322 Y_RNA.72-201ENST00000362894 103 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 Y_RNA.146-201ENST00000363549 102 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 SNORD45.3-201ENST00000363836 72 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RNU6-268P-201ENST00000364174 107 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 Y_RNA.242-201ENST00000364473 110 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RNU4-24P-201ENST00000364565 139 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.1□□□□□ -2.39
UPK1AO00322 MIR518A1-201ENST00000385068 85 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 MIR1295A-201ENST00000408463 79 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 Y_RNA.605-201ENST00000410577 105 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 MCFD2P1-201ENST00000417812 300 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 MTND1P2-201ENST00000430604 821 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 SNRPGP12-201ENST00000449481 213 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RPL30P15-201ENST00000457129 321 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RNU7-169P-201ENST00000459456 61 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 RNU7-4P-201ENST00000516961 62 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 MIR4676-201ENST00000583078 72 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 MIR5188-201ENST00000583467 113 ntBASIC0.1□□□□□ -2.39
UPK1AO00322 Y_RNA.508-201ENST00000384502 114 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 MIR628-201ENST00000385229 95 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 AC024067.1-201ENST00000426199 223 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC0.09□□□□□ -2.4
UPK1AO00322 RN7SKP295-201ENST00000517264 153 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 AC024405.2-202ENST00000532731 184 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 MIR2681-201ENST00000581814 105 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 AC005730.3-201ENST00000583067 366 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 AC060780.3-201ENST00000589464 80 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 LARP7P1-201ENST00000605576 316 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 PVT1_3.1-201ENST00000620853 95 ntBASIC0.09□□□□□ -2.4
UPK1AO00322 SNORD44.1-201ENST00000363202 61 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 RNU6-1209P-201ENST00000363655 107 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 Y_RNA.269-201ENST00000364685 89 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 RNA5SP517-201ENST00000364724 117 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 Y_RNA.339-201ENST00000365325 102 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 Y_RNA.456-201ENST00000384232 111 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 RNU6-125P-201ENST00000384505 107 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 MIR938-201ENST00000401216 83 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 SNRPGP14-201ENST00000435400 219 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 RNU7-62P-201ENST00000458856 62 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 MIR4659A-201ENST00000580269 81 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 AP001178.1-201ENST00000584679 268 ntTSL 3 BASIC0.08□□□□□ -2.4
UPK1AO00322 AC022441.3-201ENST00000605737 136 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 AC011476.5-201ENST00000615594 130 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 AL669831.3-213ENST00000636676 183 ntBASIC0.08□□□□□ -2.4
UPK1AO00322 Y_RNA.310-201ENST00000365063 113 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 AC005042.3-201ENST00000453230 174 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 RNU7-56P-201ENST00000458744 62 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 AC107297.1-201ENST00000459991 176 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC0.07□□□□□ -2.4
UPK1AO00322 RNU6-1213P-201ENST00000517075 94 ntBASIC0.07□□□□□ -2.4
UPK1AO00322 AC008507.4-201ENST00000585464 127 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 102 ms