Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 ZNF702P-202ENST00000434269 1966 ntBASIC2.31□□□□□ -2.04
CBX4O00257 snoU2-30.1-201ENST00000365012 70 ntBASIC2.31□□□□□ -2.04
CBX4O00257 Y_RNA.337-201ENST00000365312 102 ntBASIC2.31□□□□□ -2.04
CBX4O00257 SNORA4.2-201ENST00000365313 147 ntBASIC2.31□□□□□ -2.04
CBX4O00257 RNU6-449P-201ENST00000383914 107 ntBASIC2.31□□□□□ -2.04
CBX4O00257 RNA5SP100-201ENST00000410903 110 ntBASIC2.31□□□□□ -2.04
CBX4O00257 RNA5SP59-201ENST00000410922 110 ntBASIC2.31□□□□□ -2.04
CBX4O00257 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC2.31□□□□□ -2.04
CBX4O00257 snoU13.27-201ENST00000459278 104 ntBASIC2.31□□□□□ -2.04
CBX4O00257 RNA5SP153-201ENST00000516498 76 ntBASIC2.31□□□□□ -2.04
CBX4O00257 RNU6-197P-201ENST00000516680 100 ntBASIC2.31□□□□□ -2.04
CBX4O00257 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.31□□□□□ -2.04
CBX4O00257 AL160236.1-201ENST00000556317 195 ntBASIC2.31□□□□□ -2.04
CBX4O00257 AC008507.4-201ENST00000585464 127 ntBASIC2.31□□□□□ -2.04
CBX4O00257 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.31□□□□□ -2.04
CBX4O00257 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.31□□□□□ -2.04
CBX4O00257 MTND1P7-201ENST00000632801 297 ntBASIC2.31□□□□□ -2.04
CBX4O00257 AC021753.1-201ENST00000635724 168 ntBASIC2.31□□□□□ -2.04
CBX4O00257 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CBX4O00257 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
CBX4O00257 AC008555.8-201ENST00000623602 2168 ntBASIC2.3□□□□□ -2.04
CBX4O00257 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
CBX4O00257 SNORD114-1-201ENST00000362705 72 ntBASIC2.3□□□□□ -2.04
CBX4O00257 SNORD14E-201ENST00000364009 85 ntBASIC2.3□□□□□ -2.04
CBX4O00257 RNU6-484P-201ENST00000384016 107 ntBASIC2.3□□□□□ -2.04
CBX4O00257 RNU6-1031P-201ENST00000384773 107 ntBASIC2.3□□□□□ -2.04
CBX4O00257 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
CBX4O00257 Y_RNA.580-201ENST00000391004 95 ntBASIC2.3□□□□□ -2.04
CBX4O00257 MIR548M-201ENST00000408260 86 ntBASIC2.3□□□□□ -2.04
CBX4O00257 RPL30P13-201ENST00000418873 348 ntBASIC2.3□□□□□ -2.04
CBX4O00257 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC2.3□□□□□ -2.04
CBX4O00257 MRPS17P9-201ENST00000511924 393 ntBASIC2.3□□□□□ -2.04
CBX4O00257 RNU6-255P-201ENST00000516957 105 ntBASIC2.3□□□□□ -2.04
CBX4O00257 MIR6873-201ENST00000622788 63 ntBASIC2.3□□□□□ -2.04
CBX4O00257 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
CBX4O00257 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.29□□□□□ -2.04
CBX4O00257 AC080100.1-201ENST00000624239 5356 ntBASIC2.29□□□□□ -2.04
CBX4O00257 RNA5SP276-201ENST00000362580 94 ntBASIC2.29□□□□□ -2.04
CBX4O00257 SNORD116-18-201ENST00000383961 92 ntBASIC2.29□□□□□ -2.04
CBX4O00257 Y_RNA.521-201ENST00000384560 114 ntBASIC2.29□□□□□ -2.04
CBX4O00257 SNORA80E-201ENST00000384744 137 ntBASIC2.29□□□□□ -2.04
CBX4O00257 SUMO1P3-201ENST00000439961 304 ntBASIC2.29□□□□□ -2.04
CBX4O00257 DEFB122-202ENST00000569013 197 ntBASIC2.29□□□□□ -2.04
CBX4O00257 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC2.29□□□□□ -2.04
CBX4O00257 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.29□□□□□ -2.04
CBX4O00257 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CBX4O00257 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CBX4O00257 Y_RNA.398-201ENST00000383952 99 ntBASIC2.28□□□□□ -2.04
CBX4O00257 RNU6-163P-201ENST00000384396 106 ntBASIC2.28□□□□□ -2.04
CBX4O00257 RNA5SP212-201ENST00000391223 107 ntBASIC2.28□□□□□ -2.04
CBX4O00257 HMGN2P32-201ENST00000444648 269 ntBASIC2.28□□□□□ -2.04
CBX4O00257 CYCTP-201ENST00000504253 315 ntBASIC2.28□□□□□ -2.04
CBX4O00257 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.28□□□□□ -2.04
CBX4O00257 SNORA31.17-201ENST00000516953 127 ntBASIC2.28□□□□□ -2.04
CBX4O00257 RNU6-365P-201ENST00000517113 106 ntBASIC2.28□□□□□ -2.04
CBX4O00257 MIR378D2-201ENST00000580636 98 ntBASIC2.28□□□□□ -2.04
CBX4O00257 Y_RNA.634-201ENST00000364811 113 ntBASIC2.27□□□□□ -2.05
CBX4O00257 RNU6-442P-201ENST00000383968 104 ntBASIC2.27□□□□□ -2.05
CBX4O00257 SNORA64-201ENST00000384674 134 ntBASIC2.27□□□□□ -2.05
CBX4O00257 SNORD45.4-201ENST00000516629 73 ntBASIC2.27□□□□□ -2.05
CBX4O00257 RNA5SP82-201ENST00000516707 92 ntBASIC2.27□□□□□ -2.05
CBX4O00257 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC2.27□□□□□ -2.05
CBX4O00257 MIR4287-201ENST00000579398 78 ntBASIC2.27□□□□□ -2.05
CBX4O00257 AC120024.3-201ENST00000603167 156 ntBASIC2.27□□□□□ -2.05
CBX4O00257 AL365434.2-201ENST00000607979 234 ntBASIC2.27□□□□□ -2.05
CBX4O00257 AC007370.2-201ENST00000506899 2694 ntTSL 5 BASIC2.27□□□□□ -2.05
CBX4O00257 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CBX4O00257 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.26□□□□□ -2.05
CBX4O00257 Y_RNA.170-201ENST00000363746 110 ntBASIC2.26□□□□□ -2.05
CBX4O00257 SNORA67.3-201ENST00000384366 140 ntBASIC2.26□□□□□ -2.05
CBX4O00257 Y_RNA.486-201ENST00000384398 107 ntBASIC2.26□□□□□ -2.05
CBX4O00257 SNORD72-201ENST00000390994 80 ntBASIC2.26□□□□□ -2.05
CBX4O00257 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.26□□□□□ -2.05
CBX4O00257 AL603825.1-201ENST00000438481 80 ntBASIC2.26□□□□□ -2.05
CBX4O00257 SCARNA16.3-201ENST00000516595 184 ntBASIC2.26□□□□□ -2.05
CBX4O00257 RNU7-121P-201ENST00000516604 62 ntBASIC2.26□□□□□ -2.05
CBX4O00257 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC2.26□□□□□ -2.05
CBX4O00257 DNAJC19P2-201ENST00000593340 302 ntBASIC2.26□□□□□ -2.05
CBX4O00257 AC104819.3-201ENST00000603264 540 ntTSL 4 BASIC2.26□□□□□ -2.05
CBX4O00257 MIR6132-201ENST00000622083 109 ntBASIC2.26□□□□□ -2.05
CBX4O00257 SNORA16B-201ENST00000364674 135 ntBASIC2.25□□□□□ -2.05
CBX4O00257 SNORD50B-201ENST00000364995 70 ntBASIC2.25□□□□□ -2.05
CBX4O00257 Y_RNA.336-201ENST00000365307 109 ntBASIC2.25□□□□□ -2.05
CBX4O00257 RNU6-746P-201ENST00000384112 109 ntBASIC2.25□□□□□ -2.05
CBX4O00257 RNU6-360P-201ENST00000390944 104 ntBASIC2.25□□□□□ -2.05
CBX4O00257 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC2.25□□□□□ -2.05
CBX4O00257 SNORD116-25-201ENST00000516517 92 ntBASIC2.25□□□□□ -2.05
CBX4O00257 AC009831.4-201ENST00000620744 325 ntBASIC2.25□□□□□ -2.05
CBX4O00257 AC027279.3-201ENST00000625055 122 ntBASIC2.25□□□□□ -2.05
CBX4O00257 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
CBX4O00257 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
CBX4O00257 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
CBX4O00257 Y_RNA.91-201ENST00000363042 107 ntBASIC2.24□□□□□ -2.05
CBX4O00257 RNU6-1130P-201ENST00000365434 107 ntBASIC2.24□□□□□ -2.05
CBX4O00257 RNU6-424P-201ENST00000384367 105 ntBASIC2.24□□□□□ -2.05
CBX4O00257 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
CBX4O00257 CALM2P4-201ENST00000430810 426 ntBASIC2.24□□□□□ -2.05
CBX4O00257 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.24□□□□□ -2.05
CBX4O00257 RNU7-200P-201ENST00000516105 62 ntBASIC2.24□□□□□ -2.05
CBX4O00257 RNU6-504P-201ENST00000516568 104 ntBASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms