Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 Y_RNA.232-201ENST00000364369 96 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 RNU1-141P-201ENST00000364623 158 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.377-201ENST00000365644 108 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.408-201ENST00000383987 102 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 RNU6-154P-201ENST00000384306 106 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 RNU6-1001P-201ENST00000411265 100 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 AC096949.1-201ENST00000412047 152 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 SNRPGP14-201ENST00000435400 219 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 MTND1P27-201ENST00000451117 902 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 AL136370.1-201ENST00000608166 691 ntBASIC-2.67□□□□□ -2.84
LINC01549A6NIU2 MIR365A-201ENST00000362260 87 ntBASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 MIR601-201ENST00000385256 79 ntBASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 MTCYBP4-201ENST00000401524 249 ntBASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 AL121757.2-201ENST00000611223 313 ntBASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 AC069503.3-201ENST00000618674 145 ntBASIC-2.68□□□□□ -2.84
LINC01549A6NIU2 MIR20A-201ENST00000362279 71 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 SNORD115-25-201ENST00000362619 82 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 RNU6-576P-201ENST00000390854 102 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 AC022028.1-201ENST00000412054 408 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 AC073464.1-201ENST00000429823 534 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 RNU7-67P-201ENST00000459003 62 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 SNORA25.16-201ENST00000516741 121 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 AL442663.2-201ENST00000554385 511 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 AC112487.2-201ENST00000637950 304 ntBASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC-2.69□□□□□ -2.84
LINC01549A6NIU2 RNU6-1138P-201ENST00000365359 106 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.547-201ENST00000384654 119 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 RNU6-588P-201ENST00000410281 105 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 AC021146.9-201ENST00000512503 156 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 AC134698.4-201ENST00000523451 826 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 MIR4520-1-201ENST00000582609 70 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 AL353803.5-201ENST00000599815 141 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 AC145423.2-201ENST00000610631 239 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 AC009159.2-201ENST00000617603 606 ntBASIC-2.7□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.178-201ENST00000363832 102 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.263-201ENST00000364659 114 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 SNORA24.1-201ENST00000384401 135 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 RNU6-913P-201ENST00000390913 95 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 MIR548K-201ENST00000408406 116 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 RNU2-9P-201ENST00000410194 145 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.598-201ENST00000410480 95 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 AL353813.1-201ENST00000440700 253 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 RNU7-74P-201ENST00000459104 62 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 SNORD18.2-201ENST00000459604 70 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 AC107027.2-201ENST00000512197 115 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 RNU6-685P-201ENST00000517088 95 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 AC104576.1-201ENST00000524225 88 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 AL662814.1-201ENST00000617364 121 ntBASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 NAA50-211ENST00000630058 177 ntTSL 5 BASIC-2.71□□□□□ -2.84
LINC01549A6NIU2 RNU6-442P-201ENST00000383968 104 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 MIR29B1-201ENST00000385015 81 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 AC091144.1-201ENST00000519573 138 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 MTND1P24-201ENST00000552175 861 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 MIR4441-201ENST00000582623 100 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 MIR548AE1-201ENST00000583292 70 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 AL445435.1-201ENST00000604232 665 ntBASIC-2.72□□□□□ -2.84
LINC01549A6NIU2 Y_RNA.192-201ENST00000363977 102 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 SNORD114-17-201ENST00000364699 75 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 RNU6-1303P-201ENST00000364841 107 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 AC018714.1-201ENST00000605028 208 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 AL450270.1-201ENST00000606160 391 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 MIR8068-201ENST00000618032 68 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 AC022418.1-201ENST00000624118 445 ntBASIC-2.73□□□□□ -2.85
LINC01549A6NIU2 RNU6-727P-201ENST00000363592 107 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 RNU6-905P-201ENST00000384434 107 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 MTND4LP14-201ENST00000429447 288 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 RPL30P10-201ENST00000488148 337 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 SNORA25.14-201ENST00000516481 132 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 YWHAEP2-201ENST00000580066 112 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 AC092574.1-201ENST00000609771 420 ntBASIC-2.74□□□□□ -2.85
LINC01549A6NIU2 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 RNU6-227P-201ENST00000362865 103 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 RNU6-268P-201ENST00000364174 107 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 Y_RNA.488-201ENST00000384403 102 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 AC098614.3-201ENST00000438957 440 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 U8.19-201ENST00000459095 133 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 U8.22-201ENST00000459141 133 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 MIR5708-201ENST00000579723 85 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 YWHAEP3-201ENST00000582767 121 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 RMST_3.1-201ENST00000611651 109 ntBASIC-2.75□□□□□ -2.85
LINC01549A6NIU2 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 RNU6-1125P-201ENST00000363601 107 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 SNORD115-8-201ENST00000363856 82 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 SNORD115-38-201ENST00000365037 82 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 RNU6-387P-201ENST00000411331 105 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 AL158053.1-201ENST00000441503 453 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 AC244090.1-201ENST00000441884 93 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 RNU7-134P-201ENST00000458997 64 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 SNORA25.10-201ENST00000515926 124 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 RNU6-966P-201ENST00000516479 104 ntBASIC-2.76□□□□□ -2.85
LINC01549A6NIU2 RNU6-958P-201ENST00000516995 106 ntBASIC-2.76□□□□□ -2.85
Retrieved 100 of 98,524 protein–RNA pairs in 196.2 ms