Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-1199P-201ENST00000411249 104 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 AC093534.1-201ENST00000504977 132 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU2-13P-201ENST00000515909 113 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 SCARNA8-201ENST00000515924 131 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-436P-201ENST00000516171 114 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU7-116P-201ENST00000516940 62 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.708-201ENST00000516950 96 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 AC005899.2-201ENST00000584353 90 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 MIR4768-201ENST00000585270 74 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 RAC1P9-201ENST00000604990 392 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 MIR6718-201ENST00000616153 80 ntBASIC0.01□□□□□ -2.41
RBFOX3A6NFN3 SNORA42.1-201ENST00000363515 137 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNY4P14-201ENST00000363656 96 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNA5SP457-201ENST00000363657 124 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNU6-268P-201ENST00000364174 107 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNU6-679P-201ENST00000391003 106 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 MTND4P28-201ENST00000426217 387 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC015818.7-201ENST00000428754 109 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC087499.7-201ENST00000441958 109 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 MTND1P29-201ENST00000448112 647 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 FCF1P4-201ENST00000448326 183 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC098826.2-201ENST00000452011 651 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RPL17P19-201ENST00000489069 552 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.682-201ENST00000516457 100 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNU6-314P-201ENST00000516574 104 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 EIF1P4-201ENST00000572664 335 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC020891.4-201ENST00000605745 93 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC0□□□□□ -2.41
RBFOX3A6NFN3 AL109933.3-201ENST00000619095 188 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 AC092794.2-201ENST00000620933 563 ntBASIC0□□□□□ -2.41
RBFOX3A6NFN3 RNA5SP325-201ENST00000363756 130 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-324P-201ENST00000363957 106 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-815P-201ENST00000384080 113 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 MIR938-201ENST00000401216 83 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 MTCO2P33-201ENST00000402100 465 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-710P-201ENST00000410424 105 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-847P-201ENST00000411115 108 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 AC073261.1-201ENST00000429409 121 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 RNU6-155P-201ENST00000516347 100 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 MIR4667-201ENST00000578933 66 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 AC005176.2-201ENST00000596933 147 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 JPX_2.1-201ENST00000614161 69 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
RBFOX3A6NFN3 SNORD114-16-201ENST00000363044 70 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 SNORD116-1-201ENST00000384335 95 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR802-201ENST00000390235 94 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR548K-201ENST00000408406 116 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 BTF3P11-201ENST00000426582 477 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR2053-201ENST00000459295 91 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 RNU4-49P-201ENST00000516080 140 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 RNU6-307P-201ENST00000516743 106 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 RNU7-181P-201ENST00000517234 74 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 AC090897.1-201ENST00000580909 226 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 SNORA25.18-201ENST00000607153 114 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR1244-1-201ENST00000612829 85 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR1244-3-201ENST00000635744 85 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR1244-2-201ENST00000636449 85 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 MIR1244-4-202ENST00000636813 85 ntBASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.02□□□□□ -2.41
RBFOX3A6NFN3 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.9-201ENST00000362354 101 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 Y_RNA.89-201ENST00000363031 102 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 SNORA63C-201ENST00000364578 129 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 RNU6-767P-201ENST00000384132 107 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 SNORA8.2-201ENST00000384372 139 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 MIR625-201ENST00000385047 85 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 RNU7-62P-201ENST00000458856 62 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 MIR5188-201ENST00000583467 113 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 AC008507.4-201ENST00000585464 127 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 AC006441.5-201ENST00000612680 209 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 AC015540.1-201ENST00000615828 501 ntBASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-0.03□□□□□ -2.41
RBFOX3A6NFN3 RNU6-926P-201ENST00000384075 107 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RNU6-601P-201ENST00000384540 107 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RNU6-855P-201ENST00000410395 104 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RPS3AP52-201ENST00000435639 297 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RPL7P42-201ENST00000481005 679 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RPS29P25-201ENST00000481709 171 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 SNORA18.4-201ENST00000516440 124 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 AC112693.2-201ENST00000556538 232 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 MIR5190-201ENST00000581537 80 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 POLR3GP1-201ENST00000594073 261 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 AP003357.1-201ENST00000604497 148 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-0.04□□□□□ -2.42
RBFOX3A6NFN3 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.05□□□□□ -2.42
RBFOX3A6NFN3 Y_RNA.230-201ENST00000364348 109 ntBASIC-0.05□□□□□ -2.42
RBFOX3A6NFN3 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.05□□□□□ -2.42
RBFOX3A6NFN3 RNU6-20P-201ENST00000384106 107 ntBASIC-0.05□□□□□ -2.42
RBFOX3A6NFN3 Y_RNA.482-201ENST00000384377 111 ntBASIC-0.05□□□□□ -2.42
RBFOX3A6NFN3 RNY3P4-201ENST00000384428 101 ntBASIC-0.05□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms