Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 ZNF415-224ENST00000601493 2132 ntTSL 1 (best) BASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AP001485.1-201ENST00000604799 199 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL008718.3-201ENST00000610217 321 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 JPX_2.1-201ENST00000614161 69 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 snoU18.1-201ENST00000629629 71 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC099654.10-201ENST00000640395 161 ntBASIC1.2□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL391987.6-201ENST00000305671 199 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1205P-201ENST00000363625 106 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.162-201ENST00000363683 102 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.461-201ENST00000384263 103 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR452-201ENST00000385020 85 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR1302-6-201ENST00000408466 90 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR1298-201ENST00000408783 112 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-955P-201ENST00000410497 104 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU1-123P-201ENST00000458950 160 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD11-201ENST00000459124 84 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 CYP3A52P-201ENST00000563326 91 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 GHRLOS.1-201ENST00000610995 70 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 U6.104-201ENST00000637979 90 ntBASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
TRBV4-1A0A0J9YWV2 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1084P-201ENST00000362498 107 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.44-201ENST00000362676 108 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.47-201ENST00000362697 108 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1309P-201ENST00000363305 108 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.336-201ENST00000365307 109 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD26-201ENST00000384147 75 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL451046.2-201ENST00000403074 277 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR1278-201ENST00000408753 81 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC015922.2-201ENST00000435593 184 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC004223.1-201ENST00000479840 271 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MTCO2P24-201ENST00000515611 426 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-322P-201ENST00000516010 103 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1045P-201ENST00000516321 107 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC090821.2-201ENST00000523552 176 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RPL23AP91-201ENST00000569211 455 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL021707.8-201ENST00000609428 183 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 U2.14-201ENST00000615943 113 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR7843-201ENST00000622274 79 ntBASIC1.18□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.149-201ENST00000363558 117 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 Y_RNA.396-201ENST00000383949 103 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR150-201ENST00000385048 84 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC090142.3-201ENST00000519012 385 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR4303-201ENST00000581299 66 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AC008507.4-201ENST00000585464 127 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RNU6-1289P-201ENST00000384431 106 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORA67.5-201ENST00000391036 107 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MTCYBP9-201ENST00000431021 303 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNRPGP14-201ENST00000435400 219 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 SNORD2.1-201ENST00000458762 69 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 RN7SKP88-201ENST00000516847 250 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 FAM106DP-201ENST00000586416 501 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 AL353621.2-201ENST00000605340 133 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 7SK.8-201ENST00000612110 250 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 7SK.11-201ENST00000615477 250 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 7SK.13-201ENST00000622040 250 ntBASIC1.16□□□□□ -2.22
TRBV4-1A0A0J9YWV2 MIR26B-201ENST00000362251 77 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.82-201ENST00000363000 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.92-201ENST00000363043 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 SNORD14E-201ENST00000364009 85 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.235-201ENST00000364412 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-740P-201ENST00000364734 105 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.306-201ENST00000365015 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.312-201ENST00000365089 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.322-201ENST00000365151 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-211P-201ENST00000384047 107 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR568-201ENST00000385036 95 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR526A2-201ENST00000390198 65 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNA5SP496-201ENST00000391240 109 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 RNU6-383P-201ENST00000410864 94 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.650-201ENST00000459002 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.777-201ENST00000516982 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR5688-201ENST00000580619 83 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.771-201ENST00000598668 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL357312.1-201ENST00000603879 298 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.789-201ENST00000622480 102 ntBASIC1.15□□□□□ -2.23
TRBV4-1A0A0J9YWV2 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 ZNF209P-201ENST00000593450 2304 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 Y_RNA.117-201ENST00000363294 101 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 MIR136-201ENST00000385207 82 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AL603910.2-201ENST00000407268 136 ntBASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC1.14□□□□□ -2.23
TRBV4-1A0A0J9YWV2 DNAJC19P9-201ENST00000555084 351 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 166.3 ms