Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.41-201ENST00000362646 102 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNA5SP214-201ENST00000363378 118 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-324P-201ENST00000363957 106 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.258-201ENST00000364613 105 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-442P-201ENST00000383968 104 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORD116-9-201ENST00000384000 95 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORD116-3-201ENST00000384287 95 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORD116-7-201ENST00000384404 95 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORD116-5-201ENST00000384462 95 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-601P-201ENST00000384540 107 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-192P-201ENST00000391253 100 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORA75.6-201ENST00000391318 127 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 MIR938-201ENST00000401216 83 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-373P-201ENST00000411247 98 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 MTND1P1-201ENST00000445453 368 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNU7-62P-201ENST00000458856 62 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RPL7P42-201ENST00000481005 679 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 SNORA18.4-201ENST00000516440 124 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.682-201ENST00000516457 100 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.714-201ENST00000517065 90 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 RNA5SP330-201ENST00000517096 96 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 AC109635.3-201ENST00000529536 185 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 uc_338.4-201ENST00000616635 176 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 MIR6740-201ENST00000618268 113 ntBASIC-0.05□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.51-201ENST00000362725 102 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 SNORA36.1-201ENST00000363424 132 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.146-201ENST00000363549 102 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.404-201ENST00000383978 102 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.446-201ENST00000384178 104 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 AL603910.2-201ENST00000407268 136 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 RNU2-16P-201ENST00000410712 136 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 MTND2P22-201ENST00000444325 1033 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 RNU7-102P-201ENST00000458948 62 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 U8.19-201ENST00000459095 133 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 RNU4-49P-201ENST00000516080 140 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-155P-201ENST00000516347 100 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 AC112693.2-201ENST00000556538 232 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 AC008507.4-201ENST00000585464 127 ntBASIC-0.06□□□□□ -2.42
TRAV41A0A0B4J266 AC010332.2-201ENST00000613083 1904 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 MIR411-201ENST00000362239 96 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-1209P-201ENST00000363655 107 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.203-201ENST00000364106 102 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-1323P-201ENST00000384025 107 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 SNORD72-201ENST00000390994 80 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC133485.4-201ENST00000561835 220 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 MIR3678-201ENST00000578455 94 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC087685.1-201ENST00000587507 141 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC104408.1-201ENST00000605241 170 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC087588.2-201ENST00000617667 426 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC092794.2-201ENST00000620933 563 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 AC098679.4-201ENST00000624241 654 ntBASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.07□□□□□ -2.42
TRAV41A0A0B4J266 OMD-201ENST00000375550 2449 ntAPPRIS P1 TSL 1 (best) BASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.72-201ENST00000362894 103 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.310-201ENST00000365063 113 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.329-201ENST00000365209 107 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-20P-201ENST00000384106 107 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 AL590004.1-201ENST00000405321 300 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-855P-201ENST00000410395 104 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-847P-201ENST00000411115 108 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 SEPT7P4-201ENST00000437076 306 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 MTND3P10-201ENST00000450967 341 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 MIR5190-201ENST00000581537 80 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 AC005176.2-201ENST00000596933 147 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 uc_338.16-201ENST00000621804 95 ntBASIC-0.08□□□□□ -2.42
TRAV41A0A0B4J266 SNORD114-5-201ENST00000362928 70 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-99P-201ENST00000364721 107 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.494-201ENST00000384432 111 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.517-201ENST00000384551 106 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR125B2-201ENST00000385128 89 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR548K-201ENST00000408406 116 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR548F5-201ENST00000408421 86 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR1278-201ENST00000408753 81 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 AC009161.1-201ENST00000417306 376 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MTND4P28-201ENST00000426217 387 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RPS3AP52-201ENST00000435639 297 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 AC098826.2-201ENST00000452011 651 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RPL23AP54-201ENST00000495129 419 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-506P-201ENST00000516553 94 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-314P-201ENST00000516574 104 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 Y_RNA.708-201ENST00000516950 96 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR2355-201ENST00000517199 87 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 AC024405.2-202ENST00000532731 184 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR4290-201ENST00000583807 95 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 POLR3GP1-201ENST00000594073 261 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 5S_rRNA.15-201ENST00000611169 127 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR6779-201ENST00000617283 64 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 MIR6755-201ENST00000619993 66 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 AP000770.2-201ENST00000623694 100 ntBASIC-0.09□□□□□ -2.42
TRAV41A0A0B4J266 RNU6-626P-201ENST00000363354 107 ntBASIC-0.1□□□□□ -2.43
TRAV41A0A0B4J266 SNORA1.2-201ENST00000365189 134 ntBASIC-0.1□□□□□ -2.43
TRAV41A0A0B4J266 Y_RNA.402-201ENST00000383972 102 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms