Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 Y_RNA.60-201ENST00000362831 98 ntBASIC-1.48□□□□□ -2.65
TRAV30A0A087WSZ9 MIRLET7F2-201ENST00000385277 83 ntBASIC-1.48□□□□□ -2.65
TRAV30A0A087WSZ9 AC073464.1-201ENST00000429823 534 ntBASIC-1.48□□□□□ -2.65
TRAV30A0A087WSZ9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC-1.48□□□□□ -2.65
TRAV30A0A087WSZ9 AP000676.1-201ENST00000533307 52 ntBASIC-1.48□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-509P-201ENST00000363519 107 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.465-201ENST00000384293 102 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.518-201ENST00000384552 113 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 MIR153-2-201ENST00000385225 87 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 RNU2-29P-201ENST00000410423 189 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 USP9YP16-201ENST00000430287 407 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 AL031667.1-201ENST00000440222 725 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-706P-201ENST00000517229 104 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 MIR548AE1-201ENST00000583292 70 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 AC073648.5-201ENST00000603502 305 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-88P-201ENST00000606801 100 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 AL512506.1-201ENST00000613918 449 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 AL662814.1-201ENST00000617364 121 ntBASIC-1.49□□□□□ -2.65
TRAV30A0A087WSZ9 SNORD114-29-201ENST00000364819 70 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 SNORD24-201ENST00000383884 75 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.390-201ENST00000383932 102 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1201P-201ENST00000384227 107 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1190P-201ENST00000410811 104 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-551P-201ENST00000516661 103 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-958P-201ENST00000516995 106 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1220P-201ENST00000517126 108 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 AC026421.1-201ENST00000519101 163 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 MTND4LP18-201ENST00000526864 291 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 UBL5P4-201ENST00000562584 236 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 MIR3684-201ENST00000579779 74 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-85P-201ENST00000605989 107 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 AC004223.4-201ENST00000612426 332 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 uc_338.10-201ENST00000621872 182 ntBASIC-1.5□□□□□ -2.65
TRAV30A0A087WSZ9 MTND5P17-201ENST00000418405 1603 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-560P-201ENST00000364007 108 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-442P-201ENST00000383968 104 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-393P-201ENST00000384475 107 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-325P-201ENST00000411132 105 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 MTND2P18-201ENST00000419962 1030 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU7-67P-201ENST00000459003 62 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 snoU13.11-201ENST00000459219 104 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 MTCO2P29-201ENST00000465212 189 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RPL30P10-201ENST00000488148 337 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 DEFB131E-201ENST00000532329 154 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 AC093023.1-201ENST00000547375 507 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 MIR5704-201ENST00000584029 77 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 AL158050.2-201ENST00000605336 568 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 AC006386.1-201ENST00000619436 415 ntBASIC-1.51□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1062P-201ENST00000383908 107 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 Z82188.1-201ENST00000436709 154 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1194P-201ENST00000516208 104 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1337P-201ENST00000516525 95 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 AC040926.1-201ENST00000530195 238 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 AC016911.1-201ENST00000613297 452 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 MIR8068-201ENST00000618032 68 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 AC072046.2-201ENST00000618366 268 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 hsa-mir-548d-1.1-201ENST00000636914 97 ntBASIC-1.52□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.179-201ENST00000363844 90 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 RNU1-141P-201ENST00000364623 158 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 SNORD115-35-201ENST00000365122 82 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 Y_RNA.361-201ENST00000365515 120 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-597P-201ENST00000365620 102 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 RNU6-1127P-201ENST00000384580 107 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 SNORA49-201ENST00000386157 136 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 SNORD70.1-201ENST00000391007 85 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 AC074085.1-201ENST00000413598 418 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 AC013244.3-201ENST00000605614 388 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 AC011603.4-201ENST00000611325 277 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 AC009248.2-201ENST00000619826 254 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 U4.1-201ENST00000620349 87 ntBASIC-1.53□□□□□ -2.65
TRAV30A0A087WSZ9 SNORD114-7-201ENST00000362520 77 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-454P-201ENST00000364292 107 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-1317P-201ENST00000364582 104 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 Y_RNA.319-201ENST00000365138 92 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 Y_RNA.450-201ENST00000384198 113 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-434P-201ENST00000384376 107 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-159P-201ENST00000391080 106 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 MTND3P8-201ENST00000412909 339 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 AC137499.1-201ENST00000427602 88 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 RPL30P15-201ENST00000457129 321 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 MTCO1P29-201ENST00000496868 288 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 SCARNA24.1-201ENST00000516465 137 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 AP003181.2-201ENST00000528941 181 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 AC109347.2-201ENST00000610220 349 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 AL121757.2-201ENST00000611223 313 ntBASIC-1.54□□□□□ -2.66
TRAV30A0A087WSZ9 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-1287P-201ENST00000362914 107 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 RNU4-75P-201ENST00000364621 146 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-30P-201ENST00000384561 107 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 RNU6-1060P-201ENST00000384664 107 ntBASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC-1.55□□□□□ -2.66
TRAV30A0A087WSZ9 Y_RNA.598-201ENST00000410480 95 ntBASIC-1.55□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms