Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 RNU6-112P-201ENST00000363599 104 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 RNU6-899P-201ENST00000363947 107 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.257-201ENST00000364596 102 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 RNU6-376P-201ENST00000384731 106 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 AC108059.2-201ENST00000434626 151 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 CPHL1P-203ENST00000471823 523 ntTSL 5 BASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 AC127455.1-201ENST00000565496 145 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 POLR3GP1-201ENST00000594073 261 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 AC073349.3-201ENST00000617616 186 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 MIR548AY-201ENST00000617669 107 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 AC100821.1-201ENST00000523153 2479 ntBASIC1.77□□□□□ -2.13
SNX9Q9Y5X1 RNU6-653P-201ENST00000363074 106 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.304-201ENST00000365011 112 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 SNORA72-201ENST00000384339 132 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.552-201ENST00000384665 112 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 RNA5SP109-201ENST00000391010 116 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 RNA5SP323-201ENST00000391094 133 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 MIR934-201ENST00000401241 83 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 RNU6-341P-201ENST00000516973 96 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 RNU6-1096P-201ENST00000517089 102 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 CBX3P4-201ENST00000538909 354 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 AC130289.1-201ENST00000577321 73 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 AC069114.2-201ENST00000604699 304 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 AL365265.1-201ENST00000621045 234 ntBASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 OSBPL1A-217ENST00000638614 84 ntTSL 5 BASIC1.76□□□□□ -2.13
SNX9Q9Y5X1 SNORA36B-201ENST00000410438 131 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.626-201ENST00000411288 95 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 COX6CP14-201ENST00000469580 174 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.679-201ENST00000516416 91 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 SNORA31.10-201ENST00000516482 106 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 RNU7-116P-201ENST00000516940 62 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 AL929325.1-201ENST00000603096 117 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 AC090425.1-201ENST00000610007 140 ntBASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
SNX9Q9Y5X1 RNU6-674P-201ENST00000363831 107 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 MIR520G-201ENST00000385064 90 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 SNORA12.1-201ENST00000390873 148 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 RNU6-847P-201ENST00000411115 108 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 RNU6-1291P-201ENST00000516591 104 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 RNA5SP437-201ENST00000517249 129 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 AC011604.1-201ENST00000545978 196 ntBASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
SNX9Q9Y5X1 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RNU4-13P-201ENST00000364019 141 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RNU4-10P-201ENST00000364383 140 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.274-201ENST00000364714 101 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RNU6-144P-201ENST00000383951 107 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.572-201ENST00000384757 98 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 MIR626-201ENST00000385032 94 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 MIR1278-201ENST00000408753 81 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 MIR1298-201ENST00000408783 112 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RN7SKP101-201ENST00000411376 320 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RNU7-94P-201ENST00000459576 63 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 RNY3P16-201ENST00000516338 101 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 AC100767.1-201ENST00000528178 123 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 AL358944.1-201ENST00000528537 144 ntBASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
SNX9Q9Y5X1 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 SNORA1B-201ENST00000362535 133 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 Y_RNA.200-201ENST00000364018 102 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 RNU6-200P-201ENST00000364743 107 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 SNORA4.2-201ENST00000365313 147 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 MIR30A-201ENST00000385092 71 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 RNU6-907P-201ENST00000390924 102 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 SNORA17.3-201ENST00000391159 129 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 MIR8054-201ENST00000620877 86 ntBASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.72□□□□□ -2.13
SNX9Q9Y5X1 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.71□□□□□ -2.13
SNX9Q9Y5X1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNU6-457P-201ENST00000363999 107 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.199-201ENST00000364014 102 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 Y_RNA.267-201ENST00000364679 109 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNU6-1080P-201ENST00000383982 107 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 MIR520A-201ENST00000384862 85 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 MIR526A2-201ENST00000390198 65 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNU6-383P-201ENST00000410864 94 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 AC018511.2-201ENST00000413431 189 ntTSL 3 BASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNU6-437P-201ENST00000459408 95 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RPL23AP54-201ENST00000495129 419 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNU6-138P-201ENST00000515952 107 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 RNA5SP458-201ENST00000516188 119 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 MIR4285-201ENST00000581001 85 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 WWP1P1-201ENST00000466609 2769 ntBASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.71□□□□□ -2.14
SNX9Q9Y5X1 AC245060.5-201ENST00000610778 3293 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms