Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 RNA5SP493-201ENST00000364115 91 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 STAG3L5P-204ENST00000443759 179 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 RPL23AP67-201ENST00000465341 474 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AL049873.1-201ENST00000480540 376 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AC114811.1-201ENST00000507207 168 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 RNU6-579P-201ENST00000516879 102 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 HSPE1P19-201ENST00000603327 295 ntBASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.19□□□□□ -1.9
HRH3Q9Y5N1 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.96-201ENST00000363092 109 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RNU6-1099P-201ENST00000363533 107 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 SNORA25.6-201ENST00000364121 118 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.219-201ENST00000364232 113 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RNU6-409P-201ENST00000384114 104 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 SNORA48.2-201ENST00000390926 124 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RNU6-733P-201ENST00000410759 104 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RNA5SP144-201ENST00000410846 116 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 AC005326.1-201ENST00000429197 123 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RPS23P4-201ENST00000487908 423 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 RN7SL504P-201ENST00000494496 287 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 MIR4694-201ENST00000578534 80 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 MIR203B-201ENST00000636080 86 ntBASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HRH3Q9Y5N1 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 RNU6-1152P-201ENST00000384576 107 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 MIR1262-201ENST00000408276 93 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC006989.1-201ENST00000427212 131 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 RN7SL594P-201ENST00000470590 287 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC113410.1-201ENST00000505029 247 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 RNU6-998P-201ENST00000515894 101 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 RNU2-27P-201ENST00000516185 142 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 IGKV2-26-201ENST00000518305 343 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC004812.1-201ENST00000540773 146 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC026333.2-201ENST00000542164 106 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC026271.5-201ENST00000577873 130 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 ZNF861P-201ENST00000588126 639 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC002984.1-201ENST00000591692 448 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC005000.2-201ENST00000605468 310 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 uc_338.25-201ENST00000613756 156 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 U4atac.1-201ENST00000618345 95 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC022149.2-201ENST00000621061 203 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC021613.1-201ENST00000623880 111 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 AC027279.3-201ENST00000625055 122 ntBASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HRH3Q9Y5N1 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-34-201ENST00000362441 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-12-201ENST00000362583 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-29-201ENST00000362834 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 RNU6-363P-201ENST00000362895 105 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-9-201ENST00000362912 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-21-201ENST00000362963 81 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-14-201ENST00000363090 81 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-13-201ENST00000363358 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-41-201ENST00000363608 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-11-201ENST00000363616 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-5-201ENST00000363633 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-39-201ENST00000363694 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-4-201ENST00000363810 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-16-201ENST00000363887 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-6-201ENST00000363942 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-42-201ENST00000364273 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-15-201ENST00000364809 81 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-1-201ENST00000364961 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-26-201ENST00000365067 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-10-201ENST00000365073 81 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-43-201ENST00000365503 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 SNORD115-36-201ENST00000365629 82 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 Y_RNA.466-201ENST00000384294 113 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 RN7SL601P-201ENST00000471221 293 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 HOTAIRM1_4.1-201ENST00000617934 102 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 AC093908.1-201ENST00000623125 8092 ntBASIC3.16□□□□□ -1.9
HRH3Q9Y5N1 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
HRH3Q9Y5N1 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.15□□□□□ -1.9
HRH3Q9Y5N1 AL356274.2-201ENST00000624379 3752 ntBASIC3.15□□□□□ -1.9
HRH3Q9Y5N1 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 RNA5SP109-201ENST00000391010 116 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 MIR1267-201ENST00000408723 78 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 IGLV3-17-201ENST00000519099 244 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 MIR3152-201ENST00000579801 74 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 MIR7851-201ENST00000610611 160 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 IGLL4P-201ENST00000614590 133 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 AC087741.2-201ENST00000619415 172 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 MIR8054-201ENST00000620877 86 ntBASIC3.15□□□□□ -1.91
HRH3Q9Y5N1 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms