Protein–RNA interactions for Protein: Q9Y5H9

PCDHA2, Protocadherin alpha-2, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA2Q9Y5H9 RNU7-149P-201ENST00000516739 59 ntBASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 MIR4662B-201ENST00000579498 81 ntBASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 AC104984.5-201ENST00000586878 94 ntBASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 AC022513.1-201ENST00000624512 117 ntBASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.62□□□□□ -1.99
PCDHA2Q9Y5H9 RNU1-58P-201ENST00000362413 163 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 RNU6-1082P-201ENST00000364574 107 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 Y_RNA.420-201ENST00000384043 110 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 RNU6-22P-201ENST00000384355 107 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 SNORA20-201ENST00000384662 132 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 RNU2-70P-201ENST00000410718 179 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 RNA5SP492-201ENST00000411330 114 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 AC245047.4-201ENST00000433189 144 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 Pinc.1-201ENST00000616452 154 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 NPPA-AS1_2.1-201ENST00000618496 149 ntBASIC2.61□□□□□ -1.99
PCDHA2Q9Y5H9 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 Y_RNA.91-201ENST00000363042 107 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 SNORD115-3-201ENST00000363100 82 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 Y_RNA.251-201ENST00000364551 99 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 SNORA26-201ENST00000391286 122 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 SNRPGP10-201ENST00000432323 225 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 RNU6-62P-201ENST00000516526 102 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 AP002004.2-201ENST00000531656 154 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 MIR1273D-201ENST00000577266 86 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 MIR3126-201ENST00000577443 74 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 MIR4648-201ENST00000580107 72 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 MIR5007-201ENST00000583098 95 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 AL137847.3-201ENST00000611521 109 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 MIR6715A-201ENST00000615929 79 ntBASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
PCDHA2Q9Y5H9 SNORA1B-201ENST00000362535 133 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 RNY1P11-201ENST00000363759 113 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 Y_RNA.486-201ENST00000384398 107 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 Y_RNA.542-201ENST00000384641 111 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 RNU6-479P-201ENST00000516348 105 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 RNA5SP137-201ENST00000516833 135 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 AC005786.1-201ENST00000588553 154 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 AP001340.1-201ENST00000624405 217 ntBASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PCDHA2Q9Y5H9 CEP57L1-201ENST00000359793 2515 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -2
PCDHA2Q9Y5H9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 Z82195.2-201ENST00000612348 18351 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 SNORA38-201ENST00000363946 132 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 SNORA25.7-201ENST00000364375 127 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 RNU1-91P-201ENST00000364746 163 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 RNU1-51P-201ENST00000365345 176 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 RNU6-460P-201ENST00000391158 108 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 LINC02277-202ENST00000556472 453 ntTSL 3 BASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 AL591926.4-201ENST00000616895 298 ntBASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 CENPQ-201ENST00000335783 1733 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PCDHA2Q9Y5H9 SNORA12.1-201ENST00000390873 148 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 SNORA11.4-201ENST00000408823 129 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 RNU2-51P-201ENST00000410708 197 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 BX510359.4-201ENST00000423750 193 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 AL035415.1-201ENST00000447150 289 ntTSL 5 BASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 snoU13.15-201ENST00000459407 104 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 AL049830.1-201ENST00000468034 425 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 MRPS17P9-201ENST00000511924 393 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 AC022217.4-201ENST00000604389 163 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 TUG1_4.1-201ENST00000619464 181 ntBASIC2.57□□□□□ -2
PCDHA2Q9Y5H9 MIR126-201ENST00000362291 85 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 RNU6-1336P-201ENST00000383886 109 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 RNU1-109P-201ENST00000383960 147 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 CYCSP49-201ENST00000420810 319 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 FTH1P12-201ENST00000432137 551 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 snoU13.26-201ENST00000459452 105 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 RPPH1-2P-201ENST00000516688 293 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 RNU6-971P-201ENST00000516920 106 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 AC090142.3-201ENST00000519012 385 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 AC008507.4-201ENST00000585464 127 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 AC087685.1-201ENST00000587507 141 ntBASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
PCDHA2Q9Y5H9 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 MIR539-201ENST00000365690 78 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 MIR522-201ENST00000385071 87 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 RNU6-1168P-201ENST00000390831 104 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 RNU6-365P-201ENST00000517113 106 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 RNA5SP402-201ENST00000517148 110 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 MIR4658-201ENST00000584344 65 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 AL365222.1-201ENST00000614661 98 ntBASIC2.55□□□□□ -2
PCDHA2Q9Y5H9 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 CXADR-202ENST00000356275 270 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 Y_RNA.66-201ENST00000362862 102 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 RNU1-138P-201ENST00000384093 164 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 SNORD72-201ENST00000390994 80 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 Y_RNA.584-201ENST00000391090 114 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 RNU2-56P-201ENST00000516826 190 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 Y_RNA.714-201ENST00000517065 90 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 IGKV3-31-201ENST00000523109 329 ntBASIC2.54□□□□□ -2
PCDHA2Q9Y5H9 AP001328.1-201ENST00000528550 176 ntBASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.6 ms