Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 RNA5SP190-201ENST00000365222 118 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-1011P-201ENST00000384668 107 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 MIR522-201ENST00000385071 87 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 AC113618.1-201ENST00000416747 285 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 AC117454.1-201ENST00000491120 168 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 RPS29P11-201ENST00000496507 171 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 RN7SKP88-201ENST00000516847 250 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 AP003072.1-201ENST00000531740 145 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 7SK.8-201ENST00000612110 250 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 7SK.11-201ENST00000615477 250 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 7SK.13-201ENST00000622040 250 ntBASIC1.58□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-674P-201ENST00000363831 107 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-457P-201ENST00000363999 107 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNA5SP363-201ENST00000365072 115 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.336-201ENST00000365307 109 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-144P-201ENST00000383951 107 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-713P-201ENST00000384761 107 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 AL627390.1-201ENST00000396055 340 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-121P-201ENST00000410525 99 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 MLLT10P1-201ENST00000418346 262 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 MTCO1P5-201ENST00000433573 344 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-437P-201ENST00000459408 95 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-922P-201ENST00000516753 99 ntBASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 NAA50-211ENST00000630058 177 ntTSL 5 BASIC1.57□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.105-201ENST00000363182 111 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 U8.7-201ENST00000364940 136 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 PIGPP3-201ENST00000425307 415 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 AC093850.1-201ENST00000454121 251 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 RPL39P39-201ENST00000455840 151 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU7-141P-201ENST00000459304 62 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 AC114811.1-201ENST00000507207 168 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 U6.104-201ENST00000637979 90 ntBASIC1.56□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-969P-201ENST00000383900 105 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 SNORA36B-201ENST00000410438 131 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-1137P-201ENST00000517073 99 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 CYP3A52P-201ENST00000563326 91 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.812-201ENST00000610788 101 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.784-201ENST00000613803 101 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.787-201ENST00000616522 101 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.780-201ENST00000617336 101 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.801-201ENST00000619005 101 ntBASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHGB3Q9Y5G1 snoU2_19.2-201ENST00000363024 80 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.140-201ENST00000363474 103 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-801P-201ENST00000364087 105 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 MIR802-201ENST00000390235 94 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-917P-201ENST00000516294 104 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 SNORD45.4-201ENST00000516629 73 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 AP000648.3-201ENST00000623539 4507 ntBASIC1.54□□□□□ -2.16
PCDHGB3Q9Y5G1 SNORD14E-201ENST00000364009 85 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.326-201ENST00000365176 113 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-1160P-201ENST00000384546 104 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 Y_RNA.541-201ENST00000384640 113 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 MIR150-201ENST00000385048 84 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6ATAC15P-201ENST00000408279 121 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 RPL21P38-201ENST00000418090 167 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 AC023449.1-201ENST00000454464 154 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-1116P-201ENST00000517269 99 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 AL160236.1-201ENST00000556317 195 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 AC005357.1-201ENST00000588399 301 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.53□□□□□ -2.16
PCDHGB3Q9Y5G1 RNU6-1205P-201ENST00000363625 106 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.338-201ENST00000365320 114 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 MTCO2P33-201ENST00000402100 465 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 AC091959.1-201ENST00000495857 238 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 SNORA31.4-201ENST00000516049 129 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.720-201ENST00000517166 92 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 FAM106DP-201ENST00000586416 501 ntBASIC1.52□□□□□ -2.17
PCDHGB3Q9Y5G1 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.64-201ENST00000362845 102 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 MIR136-201ENST00000385207 82 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 SNORD41-201ENST00000386967 70 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 SNORA26.5-201ENST00000391215 123 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 SNORD13-201ENST00000459299 104 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 SERF1AP1-201ENST00000514575 187 ntBASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
PCDHGB3Q9Y5G1 RNU6-1272P-201ENST00000362776 107 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.84-201ENST00000363011 104 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 RNU6-442P-201ENST00000383968 104 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 MIR1298-201ENST00000408783 112 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 RN7SKP101-201ENST00000411376 320 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 AC108667.1-201ENST00000428618 249 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 AC098869.1-201ENST00000481627 292 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 SNORA27.4-201ENST00000516650 95 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 MIR4498-201ENST00000577599 66 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 MIR5688-201ENST00000580619 83 ntBASIC1.5□□□□□ -2.17
PCDHGB3Q9Y5G1 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.49□□□□□ -2.17
PCDHGB3Q9Y5G1 RNU6-1209P-201ENST00000363655 107 ntBASIC1.49□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.796-201ENST00000364268 102 ntBASIC1.49□□□□□ -2.17
PCDHGB3Q9Y5G1 Y_RNA.799-201ENST00000364992 102 ntBASIC1.49□□□□□ -2.17
PCDHGB3Q9Y5G1 RNU6-806P-201ENST00000365147 105 ntBASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms