Protein–RNA interactions for Protein: Q9Y3E1

HDGFL3, Hepatoma-derived growth factor-related protein 3, humanhuman

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3Q9Y3E1 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 CEP57L1P1-201ENST00000430943 1201 ntBASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 AL583859.1-201ENST00000455871 335 ntTSL 3 BASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 AC087685.1-201ENST00000587507 141 ntBASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 MIR6863-201ENST00000636112 90 ntBASIC-0.22□□□□□ -2.44
HDGFL3Q9Y3E1 RNU6-874P-201ENST00000362390 105 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 Y_RNA.256-201ENST00000364594 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-747P-201ENST00000390928 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-241P-201ENST00000391148 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNA5SP496-201ENST00000391240 109 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-447P-201ENST00000410293 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1118P-201ENST00000410382 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1076P-201ENST00000410397 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-355P-201ENST00000410427 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-791P-201ENST00000410467 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-705P-201ENST00000410601 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1100P-201ENST00000410691 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-860P-201ENST00000410860 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNA5SP127-201ENST00000411051 133 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1217P-201ENST00000411276 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-785P-201ENST00000411324 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU7-62P-201ENST00000458856 62 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNU7-102P-201ENST00000458948 62 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RPL17P19-201ENST00000489069 552 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 SNORA18.4-201ENST00000516440 124 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 AC105029.1-201ENST00000520250 669 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 U6.90-201ENST00000614007 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 AC004467.1-201ENST00000615678 330 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 U6.70-201ENST00000620287 104 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 NEAT1_2.1-201ENST00000620525 105 ntBASIC-0.23□□□□□ -2.45
HDGFL3Q9Y3E1 RNA5SP457-201ENST00000363657 124 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-442P-201ENST00000383968 104 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 MIR125B2-201ENST00000385128 89 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 MTCO3P40-201ENST00000392516 676 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 USP9YP30-201ENST00000430729 455 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 MIR18B-201ENST00000454574 71 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 RNU7-87P-201ENST00000459343 62 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 AC091959.1-201ENST00000495857 238 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 RNU7-181P-201ENST00000517234 74 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 SNORD92-201ENST00000585078 85 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 uc_338.6-201ENST00000613544 171 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 AC090517.2-201ENST00000614966 680 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 AL109933.3-201ENST00000619095 188 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 MIR6755-201ENST00000619993 66 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 AL359880.1-201ENST00000621879 266 ntBASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 LRRIQ3-204ENST00000395089 2673 ntAPPRIS P2 TSL 5 BASIC-0.24□□□□□ -2.45
HDGFL3Q9Y3E1 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-324P-201ENST00000363957 106 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-268P-201ENST00000364174 107 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 SNORA63C-201ENST00000364578 129 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 SNORA1.2-201ENST00000365189 134 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNA5SP117-201ENST00000365294 118 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-364P-201ENST00000384387 107 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 MIR610-201ENST00000385139 96 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-908P-201ENST00000410160 94 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-847P-201ENST00000411115 108 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 AC090844.1-201ENST00000422019 156 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 RPL23AP54-201ENST00000495129 419 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 SCARNA8-201ENST00000515924 131 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 AL512360.1-201ENST00000555346 234 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 AC133485.4-201ENST00000561835 220 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 MIR4305-201ENST00000583252 102 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 AL162413.1-201ENST00000603198 110 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 AC005014.2-201ENST00000607795 599 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 MIR6779-201ENST00000617283 64 ntBASIC-0.25□□□□□ -2.45
HDGFL3Q9Y3E1 SNORA72.1-201ENST00000363485 129 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6V-201ENST00000384105 107 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 Y_RNA.553-201ENST00000384670 102 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 PCNPP3-201ENST00000393579 471 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 SNORD12B-201ENST00000410433 91 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 SNORD5.1-201ENST00000458800 75 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC011352.1-201ENST00000512300 793 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 RNA5SP268-201ENST00000516828 124 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 NKAIN2-205ENST00000546092 148 ntTSL 5 BASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC055872.1-201ENST00000570978 278 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 MIR3942-201ENST00000585264 109 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC018638.8-201ENST00000588755 281 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC006380.1-201ENST00000603598 186 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 AC067863.3-201ENST00000624172 122 ntBASIC-0.26□□□□□ -2.45
HDGFL3Q9Y3E1 MTND5P26-201ENST00000426018 1752 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 Y_RNA.85-201ENST00000363014 111 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 MTND3P21-201ENST00000433774 331 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 CHEK2P4-201ENST00000450340 246 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 AC005042.3-201ENST00000453230 174 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 RNU6-1281P-201ENST00000516223 105 ntBASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC-0.27□□□□□ -2.45
HDGFL3Q9Y3E1 AC119751.7-201ENST00000600494 245 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 181.5 ms