Protein–RNA interactions for Protein: Q9UQD0

SCN8A, Sodium channel protein type 8 subunit alpha, humanhuman

Predictions only

Length 1,980 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8AQ9UQD0 Y_RNA.706-201ENST00000516933 99 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 MIR3915-201ENST00000578518 97 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 AC100830.2-201ENST00000581636 240 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 AC006380.1-201ENST00000603598 186 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 U6.90-201ENST00000614007 104 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 U6.70-201ENST00000620287 104 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 AC127459.3-201ENST00000624328 466 ntBASIC-0.44□□□□□ -2.48
SCN8AQ9UQD0 SNORA36.1-201ENST00000363424 132 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 SNORD115-30-201ENST00000364117 82 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.358-201ENST00000365491 99 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 MT-TF-201ENST00000387314 71 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 MIR873-201ENST00000401120 77 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 AC090844.1-201ENST00000422019 156 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 EIF1P2-201ENST00000428233 350 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 ZNF736P8Y-201ENST00000451913 669 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU7-181P-201ENST00000517234 74 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 POLR3GP1-201ENST00000594073 261 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU6-1322P-201ENST00000364309 107 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 SNORA63C-201ENST00000364578 129 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.368-201ENST00000365547 113 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.533-201ENST00000384596 114 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 MT-TH-201ENST00000387441 69 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 MIR1257-201ENST00000408490 117 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU6-847P-201ENST00000411115 108 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 MTATP6P13-201ENST00000438531 667 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU6-1129P-201ENST00000515964 104 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 RNU7-156P-201ENST00000517214 74 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 AL118558.2-201ENST00000556294 238 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 AC008608.1-201ENST00000603910 127 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 Z94722.1-201ENST00000604328 474 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 AL391099.1-201ENST00000624635 187 ntBASIC-0.45□□□□□ -2.48
SCN8AQ9UQD0 ZNF299P-201ENST00000406845 1804 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 RNA5SP275-201ENST00000363936 118 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 BTF3P11-201ENST00000426582 477 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 RNU6-63P-201ENST00000516690 95 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 IGKV1-22-201ENST00000524313 326 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AC006157.1-201ENST00000611750 366 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AL354950.2-201ENST00000617939 290 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 SNORD115-24-201ENST00000363528 82 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 SNORD38B-201ENST00000384690 67 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AL356010.2-201ENST00000422844 197 ntTSL 3 BASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 MTND1P27-201ENST00000451117 902 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 RNU7-129P-201ENST00000516128 62 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AC009094.1-201ENST00000564443 426 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 RNU6-89P-201ENST00000606519 100 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AC023510.2-201ENST00000622162 746 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 AC007494.3-201ENST00000624660 743 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 SNORD38B-202ENST00000625943 69 ntBASIC-0.46□□□□□ -2.48
SCN8AQ9UQD0 RNU6-324P-201ENST00000363957 106 ntBASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.242-201ENST00000364473 110 ntBASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 MTND1P17-201ENST00000448961 204 ntBASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 AC004223.4-201ENST00000612426 332 ntBASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 JPX_2.1-201ENST00000614161 69 ntBASIC-0.47□□□□□ -2.48
SCN8AQ9UQD0 Y_RNA.381-201ENST00000365666 102 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 SNORA72-201ENST00000384339 132 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU6-855P-201ENST00000410395 104 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU6-248P-201ENST00000410720 107 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 MTCO1P5-201ENST00000433573 344 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 MTND3P21-201ENST00000433774 331 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 UBE2V1P7-201ENST00000446395 340 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 MTND4P19-201ENST00000446659 478 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AC090617.3-201ENST00000573670 475 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 MIR5188-201ENST00000583467 113 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AC073648.5-201ENST00000603502 305 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 MIR3666-201ENST00000607845 111 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AL162376.1-201ENST00000624117 175 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 SNORA72.3-201ENST00000365074 132 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU6-136P-201ENST00000384663 107 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU6-625P-201ENST00000459412 107 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU2-13P-201ENST00000515909 113 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNA5SP401-201ENST00000515920 127 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 SNORA25.10-201ENST00000515926 124 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 AC092447.9-201ENST00000603395 144 ntBASIC-0.48□□□□□ -2.49
SCN8AQ9UQD0 RNU6-254P-201ENST00000363377 107 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 Y_RNA.201-201ENST00000364052 96 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 RNU6-127P-201ENST00000390897 107 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 AC015818.7-201ENST00000428754 109 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 POLR2KP2-201ENST00000438155 177 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 AC087499.7-201ENST00000441958 109 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 RNU7-66P-201ENST00000459469 62 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 RNU6-759P-201ENST00000516740 103 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 AC006600.1-201ENST00000572529 153 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 MIR548AD-201ENST00000584780 82 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 MTND1P7-201ENST00000632801 297 ntBASIC-0.49□□□□□ -2.49
SCN8AQ9UQD0 Y_RNA.174-201ENST00000363781 105 ntBASIC-0.5□□□□□ -2.49
SCN8AQ9UQD0 RNU6-297P-201ENST00000384636 107 ntBASIC-0.5□□□□□ -2.49
SCN8AQ9UQD0 MIR802-201ENST00000390235 94 ntBASIC-0.5□□□□□ -2.49
SCN8AQ9UQD0 AC091959.1-201ENST00000495857 238 ntBASIC-0.5□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 132.5 ms