Protein–RNA interactions for Protein: Q9UPN6

SCAF8, Protein SCAF8, humanhuman

Known RBP Predictions only

Length 1,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8Q9UPN6 SNORA48.1-201ENST00000390879 135 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 AC117454.1-201ENST00000491120 168 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 MTND5P41-201ENST00000517498 206 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 MIR548AY-201ENST00000617669 107 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 MIR338-201ENST00000636369 67 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.22□□□□□ -2.05
SCAF8Q9UPN6 ZNF720P1-201ENST00000562403 1939 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.8-201ENST00000362353 102 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.24-201ENST00000362508 103 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.75-201ENST00000362927 97 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 MIR526A2-201ENST00000390198 65 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 AC010409.1-201ENST00000487382 476 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 TRMT112P2-201ENST00000512910 132 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 RN7SKP164-201ENST00000516138 266 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 RNU7-115P-201ENST00000516433 55 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 RNU6-406P-201ENST00000516470 107 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 RNU6-63P-201ENST00000516690 95 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 AC024995.1-201ENST00000523014 93 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 AC108706.1-201ENST00000611053 297 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 5S_rRNA.13-201ENST00000622298 123 ntBASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
SCAF8Q9UPN6 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU6-312P-201ENST00000364629 107 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 SNORA16B-201ENST00000364674 135 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU6-969P-201ENST00000383900 105 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU6-144P-201ENST00000383951 107 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.398-201ENST00000383952 99 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.508-201ENST00000384502 114 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 MIR17-201ENST00000385012 84 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNA5SP212-201ENST00000391223 107 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL512604.1-201ENST00000404812 257 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL117342.1-201ENST00000404861 406 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL158823.1-201ENST00000418441 478 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AC069257.2-201ENST00000441819 155 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RPS27P22-201ENST00000478056 241 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RPL36AP21-201ENST00000490372 323 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.797-201ENST00000515977 94 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU7-200P-201ENST00000516105 62 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU6-1041P-201ENST00000516254 102 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 RNU6-250P-201ENST00000516958 103 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 MIR3683-201ENST00000580847 82 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 hsa-mir-548d-2.1-201ENST00000582790 97 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AP003357.1-201ENST00000604497 148 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AC005972.2-201ENST00000604690 348 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 AL359821.1-201ENST00000605519 182 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 CENPCP1-201ENST00000533085 2578 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 ZNF355P-201ENST00000427301 3216 ntBASIC2.2□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.23-201ENST00000362496 106 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-103P-201ENST00000363686 107 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-275P-201ENST00000364910 107 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-117P-201ENST00000365415 107 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNY1P5-201ENST00000383890 115 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-1323P-201ENST00000384025 107 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 MIR597-201ENST00000384968 97 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 SNORA36B-201ENST00000410438 131 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 SEPT7P4-201ENST00000437076 306 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 HMGN2P34-201ENST00000437647 269 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 LINC02534-201ENST00000446525 283 ntTSL 3 BASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 SCARNA8-201ENST00000515924 131 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-346P-201ENST00000516288 111 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-453P-201ENST00000516819 85 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 RNU6-789P-201ENST00000517105 102 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 MIR5688-201ENST00000580619 83 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 MIR4744-201ENST00000581563 82 ntBASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.19□□□□□ -2.06
SCAF8Q9UPN6 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.272-201ENST00000364696 102 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 RNU6-578P-201ENST00000390980 103 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 RNA5SP511-201ENST00000410487 115 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 RNU6-383P-201ENST00000410864 94 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 AC127455.1-201ENST00000565496 145 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 MIR4724-201ENST00000579485 89 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 POLR3GP1-201ENST00000594073 261 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 AC069114.2-201ENST00000604699 304 ntBASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.18□□□□□ -2.06
SCAF8Q9UPN6 MIR367-201ENST00000362299 68 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNU1-22P-201ENST00000363334 158 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNU1-96P-201ENST00000364163 162 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.229-201ENST00000364347 113 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNU6-1019P-201ENST00000364424 107 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNU6-1130P-201ENST00000365434 107 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 MIR616-201ENST00000385293 97 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 Y_RNA.580-201ENST00000391004 95 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 RNA5SP501-201ENST00000410990 112 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 AL021397.1-201ENST00000451806 248 ntBASIC2.17□□□□□ -2.06
SCAF8Q9UPN6 AL353742.1-201ENST00000453455 224 ntTSL 3 BASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105.2 ms