Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 MTND1P2-201ENST00000430604 821 ntBASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 RNA5SP255-201ENST00000516370 107 ntBASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 AC136628.3-201ENST00000521868 290 ntBASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 AC022306.2-201ENST00000617563 647 ntBASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 MIR6835-201ENST00000621552 64 ntBASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC0.71□□□□□ -2.3
NPIPA1Q9UND3 SNORD114-26-201ENST00000363543 72 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 snoU2-30.1-201ENST00000365012 70 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.329-201ENST00000365209 107 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 RNU6-131P-201ENST00000391144 107 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.599-201ENST00000410489 109 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 SNRPGP10-201ENST00000432323 225 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 FABP5P4-201ENST00000437203 171 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 MIR4764-201ENST00000580680 88 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 AC113139.1-201ENST00000605049 239 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 SEPT14P17-201ENST00000617978 177 ntBASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 NAA50-211ENST00000630058 177 ntTSL 5 BASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 SERPINI2-207ENST00000476257 1837 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
NPIPA1Q9UND3 SNORD50B-201ENST00000364995 70 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 AC117470.1-201ENST00000381974 330 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 MIR508-201ENST00000384857 115 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 RNU6-855P-201ENST00000410395 104 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.619-201ENST00000410951 90 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 AC131055.1-201ENST00000584626 316 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 AC106800.4-201ENST00000614905 153 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 AC133104.2-201ENST00000615272 193 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 MTND4LP32-201ENST00000636111 270 ntBASIC0.69□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.146-201ENST00000363549 102 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.393-201ENST00000383936 102 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 SNORA72-201ENST00000384339 132 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 MIR1185-1-201ENST00000408598 86 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.714-201ENST00000517065 90 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 AC109810.1-201ENST00000534066 224 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 U6.92-201ENST00000636464 89 ntBASIC0.68□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.230-201ENST00000364348 109 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 RNU6-1175P-201ENST00000365200 107 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 RNU6-1335P-201ENST00000365426 107 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.474-201ENST00000384341 102 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 MIR216A-201ENST00000385063 110 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 SNORD89-201ENST00000390981 114 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 MCFD2P1-201ENST00000417812 300 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 RPS26P5-201ENST00000418544 335 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 AL035398.1-201ENST00000430869 322 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 SNORD123-201ENST00000459473 70 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 RNU6-699P-201ENST00000517081 110 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 AP003716.2-201ENST00000528260 108 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 AL590095.2-201ENST00000604136 117 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 AC022441.3-201ENST00000605737 136 ntBASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
NPIPA1Q9UND3 RNU6-490P-201ENST00000362985 107 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.259-201ENST00000364619 101 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.368-201ENST00000365547 113 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 MIR15B-201ENST00000385045 98 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 MIR559-201ENST00000385188 96 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 AC099799.1-201ENST00000439809 192 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 HMGN2P32-201ENST00000444648 269 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 RNU6-911P-201ENST00000516523 104 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 RNU7-43P-201ENST00000516554 64 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 RN7SKP295-201ENST00000517264 153 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 AC006600.1-201ENST00000572529 153 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 AL353765.1-201ENST00000605514 183 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 AC025253.1-201ENST00000613623 543 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 AC138305.3-201ENST00000624988 240 ntBASIC0.66□□□□□ -2.3
NPIPA1Q9UND3 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.65□□□□□ -2.3
NPIPA1Q9UND3 Y_RNA.27-201ENST00000362540 103 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 Y_RNA.148-201ENST00000363557 117 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 Y_RNA.341-201ENST00000365341 102 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 RNY1P4-201ENST00000384595 115 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 AC098614.3-201ENST00000438957 440 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 AC069023.1-201ENST00000442231 221 ntTSL 3 BASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 U8.19-201ENST00000459095 133 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 AC117454.1-201ENST00000491120 168 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 AC104465.1-201ENST00000611365 139 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 MIR6779-201ENST00000617283 64 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 7SK.10-201ENST00000621414 298 ntBASIC0.65□□□□□ -2.31
NPIPA1Q9UND3 RNA5SP48-201ENST00000363969 126 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 SNORD14E-201ENST00000364009 85 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 RNU6-710P-201ENST00000410424 105 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 MTND5P15-201ENST00000434246 349 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 AC005042.3-201ENST00000453230 174 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 RN7SKP164-201ENST00000516138 266 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 SNORA20.3-201ENST00000516880 132 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 AC093027.1-201ENST00000546698 429 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 RN7SL793P-201ENST00000583259 296 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 POLR3GP1-201ENST00000594073 261 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 RNU6-94P-201ENST00000607728 107 ntBASIC0.64□□□□□ -2.31
NPIPA1Q9UND3 AL590004.1-201ENST00000405321 300 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 SNORD99-201ENST00000408612 74 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 AC004812.1-201ENST00000540773 146 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 AC005730.3-201ENST00000583067 366 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 VN1R91P-201ENST00000594377 169 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 AL355073.2-201ENST00000612106 557 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 MIR6513-201ENST00000621188 64 ntBASIC0.63□□□□□ -2.31
NPIPA1Q9UND3 AC134026.1-201ENST00000623249 2239 ntBASIC0.62□□□□□ -2.31
NPIPA1Q9UND3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.62□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 129.9 ms