Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 RNU6-163P-201ENST00000384396 106 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 RNY1P4-201ENST00000384595 115 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 AC093850.1-201ENST00000454121 251 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 SNORA25.10-201ENST00000515926 124 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 AC040926.1-201ENST00000530195 238 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 AC091812.1-201ENST00000432235 1948 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 SNORA25.8-201ENST00000364831 128 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.341-201ENST00000365341 102 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.395-201ENST00000383945 109 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 SNORD63-201ENST00000384262 68 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.471-201ENST00000384312 102 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 SNORD116-13-201ENST00000384408 92 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 AL451046.2-201ENST00000403074 277 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.714-201ENST00000517065 90 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 AL050343.2-201ENST00000607338 280 ntBASIC2.07□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.251-201ENST00000364551 99 ntBASIC2.06□□□□□ -2.08
SHROOM4Q9ULL8 RPS20P10-201ENST00000451209 253 ntBASIC2.06□□□□□ -2.08
SHROOM4Q9ULL8 RNA5SP476-201ENST00000516613 103 ntBASIC2.06□□□□□ -2.08
SHROOM4Q9ULL8 MIRLET7C-201ENST00000362160 84 ntBASIC2.05□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.143-201ENST00000363520 106 ntBASIC2.05□□□□□ -2.08
SHROOM4Q9ULL8 MIR4423-201ENST00000580922 80 ntBASIC2.05□□□□□ -2.08
SHROOM4Q9ULL8 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 MIR369-201ENST00000362155 70 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 RNU6-1084P-201ENST00000362498 107 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.419-201ENST00000384041 102 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 RNU6-21P-201ENST00000384710 107 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 MIR216A-201ENST00000385063 110 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 SEPT14P8-201ENST00000508026 178 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 RNU6-922P-201ENST00000516753 99 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 AL357312.1-201ENST00000603879 298 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 AC007485.1-201ENST00000616755 206 ntBASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.456-201ENST00000384232 111 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.551-201ENST00000384661 102 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 DYNLT3P2-201ENST00000442517 295 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.681-201ENST00000516445 113 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 RNU7-116P-201ENST00000516940 62 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 MIR4295-201ENST00000585286 85 ntBASIC2.03□□□□□ -2.08
SHROOM4Q9ULL8 Y_RNA.172-201ENST00000363765 102 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-1248P-201ENST00000391096 64 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-855P-201ENST00000410395 104 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 CYCTP-201ENST00000504253 315 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 C8orf59P2-201ENST00000603441 271 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 SNORD114-21-201ENST00000606412 72 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 AC007742.2-201ENST00000618226 398 ntBASIC2.02□□□□□ -2.09
SHROOM4Q9ULL8 SNORA72-201ENST00000384339 132 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 MLLT10P1-201ENST00000418346 262 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-947P-201ENST00000516264 106 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-966P-201ENST00000516479 104 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 MIR6857-201ENST00000613267 93 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.813-201ENST00000364639 102 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.368-201ENST00000365547 113 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 SNORD42.2-201ENST00000365570 69 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-1323P-201ENST00000384025 107 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.445-201ENST00000384168 102 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 RPL39P39-201ENST00000455840 151 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 AL020996.3-201ENST00000606617 222 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 AL591926.4-201ENST00000616895 298 ntBASIC2.01□□□□□ -2.09
SHROOM4Q9ULL8 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
SHROOM4Q9ULL8 RNU5E-4P-201ENST00000364931 120 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 SNORA63.7-201ENST00000365579 123 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-937P-201ENST00000384325 106 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 MTND4P19-201ENST00000446659 478 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 MIR4762-201ENST00000585261 75 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 POLR3GP1-201ENST00000594073 261 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 AC120024.3-201ENST00000603167 156 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 SNORD113-5-201ENST00000607261 78 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 AC004832.4-201ENST00000608952 331 ntBASIC2□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.433-201ENST00000384089 102 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.460-201ENST00000384255 102 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.639-201ENST00000458981 102 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 HMGN1P10-201ENST00000474557 553 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-1116P-201ENST00000517269 99 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 AC090574.1-201ENST00000623186 233 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 AC068647.2-201ENST00000637380 353 ntBASIC1.99□□□□□ -2.09
SHROOM4Q9ULL8 MIR150-201ENST00000385048 84 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 MIR618-201ENST00000385287 98 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-1054P-201ENST00000411293 104 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 AL591704.2-201ENST00000421658 181 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 PIGPP3-201ENST00000425307 415 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 LINC01399-202ENST00000458450 244 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 AC124312.5-201ENST00000604451 268 ntBASIC1.98□□□□□ -2.09
SHROOM4Q9ULL8 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 RNA5SP327-201ENST00000362494 101 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 SNORD81.1-201ENST00000363064 77 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.310-201ENST00000365063 113 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-955P-201ENST00000410497 104 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 AC114811.1-201ENST00000507207 168 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 RNU6-917P-201ENST00000516294 104 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 AL160236.1-201ENST00000556317 195 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 AC019288.1-201ENST00000557918 224 ntBASIC1.97□□□□□ -2.09
SHROOM4Q9ULL8 Y_RNA.128-201ENST00000363391 112 ntBASIC1.96□□□□□ -2.1
SHROOM4Q9ULL8 RNU4-38P-201ENST00000364472 129 ntBASIC1.96□□□□□ -2.1
SHROOM4Q9ULL8 RNU6-939P-201ENST00000384634 107 ntBASIC1.96□□□□□ -2.1
SHROOM4Q9ULL8 MIR1285-1-201ENST00000408593 84 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms