Protein–RNA interactions for Protein: Q9UI47

CTNNA3, Catenin alpha-3, humanhuman

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA3Q9UI47 AC087588.2-201ENST00000617667 426 ntBASIC0.57□□□□□ -2.32
CTNNA3Q9UI47 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 MIR103A2-201ENST00000362154 78 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.166-201ENST00000363730 102 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 RNU6-961P-201ENST00000363893 105 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.230-201ENST00000364348 109 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 RNU6-136P-201ENST00000384663 107 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 MIR520C-201ENST00000385005 87 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 SNORA69.1-201ENST00000390904 137 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.592-201ENST00000410274 109 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 FCF1P4-201ENST00000448326 183 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 FGF7P6-202ENST00000451282 293 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.691-201ENST00000516611 103 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 AC109810.1-201ENST00000534066 224 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 MIR4764-201ENST00000580680 88 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Z83818.1-201ENST00000603584 150 ntBASIC0.56□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.253-201ENST00000364562 112 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.370-201ENST00000365589 108 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORD14.1-201ENST00000365609 90 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORA50A-201ENST00000384225 134 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORA72-201ENST00000384339 132 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORD111-201ENST00000408139 94 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORD99-201ENST00000408612 74 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 MTND1P4-201ENST00000435196 415 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 AL392103.1-201ENST00000447000 198 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 SNORA25.10-201ENST00000515926 124 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 RNU6-911P-201ENST00000516523 104 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.714-201ENST00000517065 90 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 AC018659.1-201ENST00000551083 169 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 AC005972.2-201ENST00000604690 348 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 AL136317.1-201ENST00000612653 226 ntBASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC0.55□□□□□ -2.32
CTNNA3Q9UI47 snoU2-30.1-201ENST00000365012 70 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.318-201ENST00000365131 97 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 RNU6-1335P-201ENST00000365426 107 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 RNU6-945P-201ENST00000383947 107 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.458-201ENST00000384240 102 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 MIR548F1-201ENST00000408667 84 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 RNU6-1199P-201ENST00000411249 104 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 SNORD45.4-201ENST00000516629 73 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 RNU7-4P-201ENST00000516961 62 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 AC036111.3-201ENST00000526389 112 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 AC087685.1-201ENST00000587507 141 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 7SK.10-201ENST00000621414 298 ntBASIC0.54□□□□□ -2.32
CTNNA3Q9UI47 Y_RNA.101-201ENST00000363154 102 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 RNU6-99P-201ENST00000364721 107 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 SNORA75.6-201ENST00000391318 127 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 CHEK2P4-201ENST00000450340 246 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 RNU7-41P-201ENST00000515917 61 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 RNU6-436P-201ENST00000516171 114 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 RNU6-830P-201ENST00000516353 107 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 RNU6-1012P-201ENST00000516606 109 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 AC144568.1-201ENST00000520139 137 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 AC055872.1-201ENST00000570978 278 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 MIR1244-1-201ENST00000612829 85 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 MIR1244-3-201ENST00000635744 85 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 MIR1244-2-201ENST00000636449 85 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 MIR1244-4-202ENST00000636813 85 ntBASIC0.53□□□□□ -2.32
CTNNA3Q9UI47 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 RNU6-1323P-201ENST00000384025 107 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 RNU6-1067P-201ENST00000384752 107 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 RNU6-1156P-201ENST00000410365 100 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 RNU6-710P-201ENST00000410424 105 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 SNORD123-201ENST00000459473 70 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 AL669831.3-213ENST00000636676 183 ntBASIC0.52□□□□□ -2.33
CTNNA3Q9UI47 RNU4-40P-201ENST00000364351 143 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.280-201ENST00000364765 112 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 SNORD78.2-201ENST00000391076 69 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.621-201ENST00000411065 96 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 RNU7-30P-201ENST00000516835 62 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 RNU6-264P-201ENST00000517134 104 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 AC023827.1-201ENST00000569247 97 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 AC005176.2-201ENST00000596933 147 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 AC022441.3-201ENST00000605737 136 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 AC025253.1-201ENST00000613623 543 ntBASIC0.51□□□□□ -2.33
CTNNA3Q9UI47 SNORD113.3-201ENST00000364630 78 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 RNU6-767P-201ENST00000384132 107 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.446-201ENST00000384178 104 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 RNU6-131P-201ENST00000391144 107 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 MIR1302-7-201ENST00000408841 72 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 AL589823.1-201ENST00000429577 183 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 AC067940.1-201ENST00000458411 300 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 RNU4ATAC7P-201ENST00000516280 125 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 RNU7-116P-201ENST00000516940 62 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 AC073869.6-201ENST00000640656 341 ntBASIC0.5□□□□□ -2.33
CTNNA3Q9UI47 RNU6-1084P-201ENST00000362498 107 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 RNU6-845P-201ENST00000362578 103 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.279-201ENST00000364763 95 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 SNORD50B-201ENST00000364995 70 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 MIR516B2-201ENST00000385190 85 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 RNU6-192P-201ENST00000391253 100 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 RNU6-613P-201ENST00000410412 108 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 Y_RNA.635-201ENST00000459041 101 ntBASIC0.49□□□□□ -2.33
CTNNA3Q9UI47 PRDX4P1-201ENST00000507189 574 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms