Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 RAC1P9-201ENST00000604990 392 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 AL096861.1-201ENST00000610899 123 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 MIR376A1-201ENST00000616574 68 ntBASIC1.22□□□□□ -2.21
CPSF2Q9P2I0 Y_RNA.28-201ENST00000362554 111 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.61-201ENST00000362835 102 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 MIR516B2-201ENST00000385190 85 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 RNU6-823P-201ENST00000391042 103 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.631-201ENST00000459607 101 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 AC117454.1-201ENST00000491120 168 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 SNORD116-28-201ENST00000516123 91 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 SNORD45.4-201ENST00000516629 73 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 AC104695.3-201ENST00000604052 296 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 MIR548AY-201ENST00000617669 107 ntBASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.203-201ENST00000364106 102 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 U8.7-201ENST00000364940 136 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 snoU2-30.1-201ENST00000365012 70 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.363-201ENST00000365529 113 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 AC117470.1-201ENST00000381974 330 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 RNU6-102P-201ENST00000384485 104 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 RNU6ATAC8P-201ENST00000408460 126 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 RPL23AP54-201ENST00000495129 419 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 AC090142.3-201ENST00000519012 385 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 MIR4421-201ENST00000578133 69 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 MIR3660-201ENST00000584845 100 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 AP000942.3-201ENST00000603702 160 ntBASIC1.2□□□□□ -2.22
CPSF2Q9P2I0 RNU6-1084P-201ENST00000362498 107 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 SNORD113-8-201ENST00000363497 74 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.222-201ENST00000364264 102 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 SNORD50B-201ENST00000364995 70 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 RNU4-62P-201ENST00000410125 130 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 HMGN2P32-201ENST00000444648 269 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 AC009474.2-201ENST00000451383 136 ntBASIC1.19□□□□□ -2.22
CPSF2Q9P2I0 MIR378A-201ENST00000362177 66 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.138-201ENST00000363462 102 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.183-201ENST00000363882 113 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 RNU6-969P-201ENST00000383900 105 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.418-201ENST00000384029 102 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 SNORA70.7-201ENST00000384159 133 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 MIR1252-201ENST00000408861 65 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 HSPE1P25-201ENST00000455484 251 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 snoU13.25-201ENST00000458945 104 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 RPS23P4-201ENST00000487908 423 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 RNU6-897P-201ENST00000517135 105 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 MIR3124-201ENST00000582636 67 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 HSPE1P19-201ENST00000603327 295 ntBASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.18□□□□□ -2.22
CPSF2Q9P2I0 RNU1-124P-201ENST00000363861 145 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU6-1048P-201ENST00000364054 107 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 SNORA72.4-201ENST00000384174 132 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 MIR136-201ENST00000385207 82 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU6-101P-201ENST00000410323 104 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.602-201ENST00000410535 92 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU2-14P-201ENST00000411053 191 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 AC092473.1-201ENST00000441098 221 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RPS29P28-201ENST00000446439 141 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU7-141P-201ENST00000459304 62 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 SNORD79.1-201ENST00000516069 84 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU6-496P-201ENST00000516145 99 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.714-201ENST00000517065 90 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 RNU6-988P-201ENST00000519081 107 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 AC136628.3-201ENST00000521868 290 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 MIR3192-201ENST00000584920 77 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 AL391903.3-201ENST00000612158 163 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 JPX_2.1-201ENST00000614161 69 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 AC134503.1-201ENST00000633048 54 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 AL442644.1-201ENST00000454390 3105 ntBASIC1.17□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.128-201ENST00000363391 112 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 RNA5SP99-201ENST00000364020 114 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 RNU6-801P-201ENST00000364087 105 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 SNORA22B-201ENST00000383876 138 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.389-201ENST00000383924 113 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 SNORD115-46-201ENST00000390982 71 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 RNU6-191P-201ENST00000516295 94 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.711-201ENST00000516993 102 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 SNORA74.3-201ENST00000517108 154 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.721-201ENST00000517207 102 ntBASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.16□□□□□ -2.22
CPSF2Q9P2I0 Y_RNA.105-201ENST00000363182 111 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 Y_RNA.140-201ENST00000363474 103 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 RNU6-1209P-201ENST00000363655 107 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 SNORA7.1-201ENST00000363750 139 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 Y_RNA.796-201ENST00000364268 102 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 Y_RNA.799-201ENST00000364992 102 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 MIR19B1-201ENST00000384829 87 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 MIR15B-201ENST00000385045 98 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 SNORD12-201ENST00000391002 90 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 RNU6-1248P-201ENST00000391096 64 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 SNORA26.5-201ENST00000391215 123 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 MIR548P-201ENST00000408336 84 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 AC063976.4-201ENST00000421971 163 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 AC245047.8-201ENST00000456455 284 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 RNU7-95P-201ENST00000459222 64 ntBASIC1.15□□□□□ -2.23
CPSF2Q9P2I0 NDUFA4P2-201ENST00000489989 244 ntBASIC1.15□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 181.9 ms