Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 RNU6-700P-201ENST00000391043 107 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC0.28□□□□□ -2.37
CCDC88CQ9P219 MIR548F1-201ENST00000408667 84 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 RNU6-602P-201ENST00000411155 105 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 MTND3P8-201ENST00000412909 339 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 RPS3AP1-201ENST00000413190 320 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AL137792.2-201ENST00000443484 235 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AC010598.1-201ENST00000510378 103 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 RNU6-1170P-201ENST00000515974 106 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AC090517.2-201ENST00000614966 680 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AL109933.3-201ENST00000619095 188 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AC139792.2-201ENST00000624218 587 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 AC100810.6-201ENST00000638068 285 ntBASIC0.28□□□□□ -2.37
CCDC88CQ9P219 SNORD50B-201ENST00000364995 70 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.329-201ENST00000365209 107 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.364-201ENST00000365532 101 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.494-201ENST00000384432 111 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.496-201ENST00000384444 101 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
CCDC88CQ9P219 RNU6-192P-201ENST00000391253 100 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC0.27□□□□□ -2.37
CCDC88CQ9P219 MTCO2P12-201ENST00000427426 682 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 MTND1P2-201ENST00000430604 821 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 AC002429.1-201ENST00000437672 148 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 AP000870.1-201ENST00000472927 406 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 AC131956.1-201ENST00000506420 258 ntTSL 2 BASIC0.27□□□□□ -2.37
CCDC88CQ9P219 RNU6-1012P-201ENST00000516606 109 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 RNU2-12P-201ENST00000517216 168 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 AP003327.1-201ENST00000529684 127 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 SNORD58B-201ENST00000607313 66 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 Z84484.1-202ENST00000612718 60 ntTSL 5 BASIC0.27□□□□□ -2.37
CCDC88CQ9P219 MIR2909-201ENST00000617113 69 ntBASIC0.27□□□□□ -2.37
CCDC88CQ9P219 RNU6-369P-201ENST00000362515 102 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.106-201ENST00000363189 100 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNU6-626P-201ENST00000363354 107 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 snoU2-30.1-201ENST00000365012 70 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 SNORD116-4-201ENST00000384733 96 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 SNORD115-47-201ENST00000391226 86 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MIR548F5-201ENST00000408421 86 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNA5SP118-201ENST00000410385 109 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MTND4P28-201ENST00000426217 387 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MTND1P14-201ENST00000427400 950 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNU7-56P-201ENST00000458744 62 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MTND4P17-201ENST00000470444 350 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AC098869.1-201ENST00000481627 292 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MIR4778-201ENST00000577635 80 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AL008636.1-201ENST00000625038 1018 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 TPTEP1-208ENST00000636884 213 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.27-201ENST00000362540 103 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNA5SP264-201ENST00000363115 107 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.412-201ENST00000384001 104 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AL390729.2-201ENST00000416137 156 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AC090844.1-201ENST00000422019 156 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MTND1P4-201ENST00000435196 415 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 SNRPGP14-201ENST00000435400 219 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNU7-169P-201ENST00000459456 61 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.714-201ENST00000517065 90 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 RNU7-181P-201ENST00000517234 74 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AC022616.4-201ENST00000522985 181 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AL096861.1-201ENST00000610899 123 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 AC092794.1-201ENST00000612734 582 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 MIR3674-201ENST00000636576 68 ntBASIC0.26□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.280-201ENST00000364765 112 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.310-201ENST00000365063 113 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-396P-201ENST00000365369 105 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-1297P-201ENST00000384415 104 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.559-201ENST00000384686 107 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 SNORD41-201ENST00000386967 70 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 SNORD28B-201ENST00000390993 75 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-131P-201ENST00000391144 107 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNA5SP299-201ENST00000391203 116 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6ATAC33P-201ENST00000408647 126 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MIR1278-201ENST00000408753 81 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL139396.1-201ENST00000421137 167 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 FCF1P4-201ENST00000448326 183 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MTND5P5-201ENST00000503764 376 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RN7SKP164-201ENST00000516138 266 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-1016P-201ENST00000516689 94 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL355375.2-201ENST00000574825 175 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MIR4790-201ENST00000577799 79 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL353765.1-201ENST00000605514 183 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AC093783.1-201ENST00000612976 329 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MIR6718-201ENST00000616153 80 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 U4.5-201ENST00000617137 123 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 SLC8A1-AS1-230ENST00000627538 212 ntTSL 5 BASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MIR103A1-201ENST00000362165 78 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 Y_RNA.331-201ENST00000365267 102 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-442P-201ENST00000383968 104 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-306P-201ENST00000384617 107 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL031003.1-201ENST00000404229 172 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU6-613P-201ENST00000410412 108 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AL589823.1-201ENST00000429577 183 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 CEP57L1P1-201ENST00000430943 1201 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 SNRPGP10-201ENST00000432323 225 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 MRPS10P1-201ENST00000448483 130 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 NDUFAF4P4-201ENST00000454883 502 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 AC116353.2-201ENST00000505332 712 ntBASIC0.25□□□□□ -2.37
CCDC88CQ9P219 RNU2-56P-201ENST00000516826 190 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms