Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-324P-201ENST00000363957 106 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNU6-767P-201ENST00000384132 107 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNU6-1013P-201ENST00000384180 107 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNY1P4-201ENST00000384595 115 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 Y_RNA.537-201ENST00000384626 109 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNU2-61P-201ENST00000411069 191 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 AL139396.1-201ENST00000421137 167 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 AC092783.1-201ENST00000435832 231 ntTSL 3 BASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 DIP2A-IT1-201ENST00000442434 428 ntTSL 2 BASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNU7-181P-201ENST00000517234 74 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RN7SL793P-201ENST00000583259 296 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 AC023932.2-201ENST00000603176 175 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 MIR4791-201ENST00000607666 84 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 AC078938.1-201ENST00000620993 318 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 uc_338.16-201ENST00000621804 95 ntBASIC-0.03□□□□□ -2.41
VAPAQ9P0L0 RNU6-1301P-201ENST00000362724 104 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RNU6-961P-201ENST00000363893 105 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.508-201ENST00000384502 114 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RNU6-125P-201ENST00000384505 107 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RNU6-831P-201ENST00000384548 107 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 MIR802-201ENST00000390235 94 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 CHEK2P4-201ENST00000450340 246 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RNU6-1012P-201ENST00000516606 109 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 SNORA62.5-201ENST00000516634 120 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RNU6-1314P-201ENST00000517139 104 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 AP003327.1-201ENST00000529684 127 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 RPL23AP91-201ENST00000569211 455 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 EIF1P4-201ENST00000572664 335 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 MIR4264-201ENST00000583520 66 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 MIR4768-201ENST00000585270 74 ntBASIC-0.04□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.101-201ENST00000363154 102 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 SNORD118-201ENST00000363593 134 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.393-201ENST00000383936 102 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 RNU6-442P-201ENST00000383968 104 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 AC074085.1-201ENST00000413598 418 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 RNU6-830P-201ENST00000516353 107 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 MIR4790-201ENST00000577799 79 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 AC018462.2-201ENST00000605375 395 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 AC063944.3-201ENST00000609969 533 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 uc_338.4-201ENST00000616635 176 ntBASIC-0.05□□□□□ -2.42
VAPAQ9P0L0 SNORD114-16-201ENST00000363044 70 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 RNU6-1090P-201ENST00000364065 94 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 RNU6-926P-201ENST00000384075 107 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 MIR938-201ENST00000401216 83 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 SNORD100-201ENST00000408573 76 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 RNU6-373P-201ENST00000411247 98 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 AC026782.1-201ENST00000512952 449 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 RNU6-863P-201ENST00000515989 104 ntBASIC-0.06□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.118-201ENST00000363300 101 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 RNA5SP214-201ENST00000363378 118 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 SNORD114-9-201ENST00000364370 72 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 SNORA8.2-201ENST00000384372 139 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 RNU6-192P-201ENST00000391253 100 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 ATP6V0E1P1-201ENST00000412537 226 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 AC009161.1-201ENST00000417306 376 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 AC017015.2-201ENST00000497946 376 ntTSL 2 BASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 SCARNA8-201ENST00000515924 131 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 MTND3P12-201ENST00000559068 328 ntBASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 VPS35-212ENST00000640313 141 ntTSL 5 BASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC-0.07□□□□□ -2.42
VAPAQ9P0L0 SNORD114-5-201ENST00000362928 70 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.796-201ENST00000364268 102 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.799-201ENST00000364992 102 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 MIR193B-201ENST00000384907 83 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 Y_RNA.594-201ENST00000410373 140 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 RNU6-1148P-201ENST00000410992 104 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 SNRPGP14-201ENST00000435400 219 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 RNU7-62P-201ENST00000458856 62 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 AC011352.1-201ENST00000512300 793 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 AC112693.2-201ENST00000556538 232 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 MIR1244-1-201ENST00000612829 85 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 JPX_2.1-201ENST00000614161 69 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 MIR1244-3-201ENST00000635744 85 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 MIR1244-2-201ENST00000636449 85 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 MIR1244-4-202ENST00000636813 85 ntBASIC-0.08□□□□□ -2.42
VAPAQ9P0L0 RNU6-268P-201ENST00000364174 107 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 SNORA1.2-201ENST00000365189 134 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 RNU6-364P-201ENST00000384387 107 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 SNORA75.6-201ENST00000391318 127 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 AL358176.2-201ENST00000425769 204 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 MTND3P21-201ENST00000433774 331 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 MTND2P22-201ENST00000444325 1033 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 RNU6-155P-201ENST00000516347 100 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 AC090897.1-201ENST00000580909 226 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 AC087685.1-201ENST00000587507 141 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 AC008608.1-201ENST00000603910 127 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 AC090517.2-201ENST00000614966 680 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 MIR371B-201ENST00000638082 66 ntBASIC-0.09□□□□□ -2.42
VAPAQ9P0L0 SNORA42.1-201ENST00000363515 137 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 Y_RNA.567-201ENST00000384736 106 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 MIR489-201ENST00000384923 84 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 RNU6-1050P-201ENST00000410388 107 ntBASIC-0.1□□□□□ -2.43
VAPAQ9P0L0 RNU6-847P-201ENST00000411115 108 ntBASIC-0.1□□□□□ -2.43
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms