Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 AL442067.1-201ENST00000613261 223 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.802-201ENST00000614892 130 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 AL365265.1-201ENST00000621045 234 ntBASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 FANCD2-213ENST00000625535 117 ntTSL 5 BASIC1.74□□□□□ -2.13
LIN7CQ9NUP9 ICE2P2-201ENST00000483823 2787 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.24-201ENST00000362508 103 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 U8.5-201ENST00000364528 136 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.292-201ENST00000364904 97 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 RNU6-969P-201ENST00000383900 105 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 RNU6-163P-201ENST00000384396 106 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 SNORA3.2-201ENST00000408221 125 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 RNU2-40P-201ENST00000410833 196 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 Z98742.3-201ENST00000418637 326 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 RPL30P13-201ENST00000418873 348 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 PIGPP3-201ENST00000425307 415 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 HSPE1P24-201ENST00000450782 238 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 AC093850.1-201ENST00000454121 251 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 MIR3198-2-201ENST00000577868 80 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 AC120024.3-201ENST00000603167 156 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 AP000942.4-201ENST00000604811 241 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 MIR8063-201ENST00000621930 81 ntBASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.73□□□□□ -2.13
LIN7CQ9NUP9 LINC00645-203ENST00000557399 3512 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 RNU6-1084P-201ENST00000362498 107 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 RNA5SP259-201ENST00000365541 109 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 SNORA8.3-201ENST00000384679 139 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.572-201ENST00000384757 98 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 MIR513A1-201ENST00000385138 129 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 MIR526A2-201ENST00000390198 65 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 SNORD58.1-201ENST00000391313 66 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 RN7SKP223-201ENST00000410582 62 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 CYCTP-201ENST00000504253 315 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AC114811.1-201ENST00000507207 168 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AC068658.1-201ENST00000507509 388 ntTSL 2 BASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 Y_RNA.714-201ENST00000517065 90 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AC100767.1-201ENST00000528178 123 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 DEFB122-202ENST00000569013 197 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 MIR5002-201ENST00000584713 97 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AC011921.3-201ENST00000605540 361 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 AP000553.5-201ENST00000641933 54 ntBASIC1.72□□□□□ -2.13
LIN7CQ9NUP9 RNA5SP160-201ENST00000364866 120 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 SNORD50B-201ENST00000364995 70 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.304-201ENST00000365011 112 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.489-201ENST00000384410 101 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 MIR626-201ENST00000385032 94 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 SNORD11-201ENST00000459124 84 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 NDUFA4P2-201ENST00000489989 244 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 AC008834.1-201ENST00000511612 175 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 RNA5SP364-201ENST00000516938 78 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 AC110588.1-201ENST00000559699 137 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 AC015688.6-201ENST00000577737 104 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 AC092881.1-201ENST00000638218 2733 ntBASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.71□□□□□ -2.14
LIN7CQ9NUP9 U8.2-201ENST00000363156 134 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 RNA5SP126-201ENST00000365092 109 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 SNORA70B-201ENST00000384210 135 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 RNA5SP338-201ENST00000410495 85 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 AL353747.2-201ENST00000439207 205 ntTSL 3 BASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 AC122707.1-201ENST00000502882 219 ntTSL 2 BASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 SNORD45.4-201ENST00000516629 73 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 AC016885.2-201ENST00000522598 261 ntTSL 3 BASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 MIR4448-201ENST00000584360 86 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 AC106754.2-201ENST00000623006 233 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 AC027279.3-201ENST00000625055 122 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 MIR219B-201ENST00000637023 88 ntBASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LIN7CQ9NUP9 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 RNU6-833P-201ENST00000363486 107 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 RNU6-379P-201ENST00000363813 104 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 snoU2-30.1-201ENST00000365012 70 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 RNY4P28-201ENST00000365281 93 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 MIR891A-201ENST00000401237 79 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 RN7SKP101-201ENST00000411376 320 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 RNU4-71P-201ENST00000516258 113 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 MIR3935-201ENST00000583472 104 ntBASIC1.69□□□□□ -2.14
LIN7CQ9NUP9 MIR302D-201ENST00000362275 68 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 RNU6-653P-201ENST00000363074 106 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.262-201ENST00000364641 102 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 MT-TG-201ENST00000387429 68 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 RNA5SP496-201ENST00000391240 109 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AC023449.1-201ENST00000454464 154 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 RNY3P16-201ENST00000516338 101 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 MIR4648-201ENST00000580107 72 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 MIR5688-201ENST00000580619 83 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AL049861.1-201ENST00000603130 150 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 AL021707.8-201ENST00000609428 183 ntBASIC1.68□□□□□ -2.14
LIN7CQ9NUP9 EVI2B-201ENST00000330927 1999 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 RNU6-199P-201ENST00000362954 107 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 RNU6-457P-201ENST00000363999 107 ntBASIC1.67□□□□□ -2.14
LIN7CQ9NUP9 Y_RNA.229-201ENST00000364347 113 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms