Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 MTND4LP11-201ENST00000422184 280 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 POLR2KP2-201ENST00000438155 177 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 MTATP6P23-201ENST00000440153 476 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 AC245047.8-201ENST00000456455 284 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 AC108729.3-201ENST00000513484 108 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 RN7SKP179-201ENST00000516126 217 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 AC127455.1-201ENST00000565496 145 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 uc_338.22-201ENST00000622722 187 ntBASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 TPTE2-204ENST00000400103 1652 ntTSL 5 BASIC1.22□□□□□ -2.21
BLOC1S4Q9NUP1 AL391516.1-201ENST00000554380 2449 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD14E-201ENST00000364009 85 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.203-201ENST00000364106 102 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.327-201ENST00000365201 102 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 MIR200A-201ENST00000384875 90 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 AL353614.1-201ENST00000445631 206 ntTSL 5 BASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 RPL23AP54-201ENST00000495129 419 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 RNU7-43P-201ENST00000516554 64 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 SNORA74.3-201ENST00000517108 154 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 AC024405.2-202ENST00000532731 184 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 AL359821.1-201ENST00000605519 182 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 AL391903.3-201ENST00000612158 163 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 MIR548AY-201ENST00000617669 107 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 AC090971.5-201ENST00000621102 293 ntBASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.80-201ENST00000362996 102 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.485-201ENST00000384395 102 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 MIR802-201ENST00000390235 94 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 UBL5P1-201ENST00000507979 193 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 RNU7-115P-201ENST00000516433 55 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 MIR4661-201ENST00000582720 75 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 AL096861.1-201ENST00000610899 123 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 MIR6078-201ENST00000611069 100 ntBASIC1.2□□□□□ -2.22
BLOC1S4Q9NUP1 RNU6-392P-201ENST00000364926 101 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.383-201ENST00000383855 97 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 AL590004.1-201ENST00000405321 300 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 AC002429.1-201ENST00000437672 148 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.639-201ENST00000458981 102 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 OR2A41P-201ENST00000473586 105 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 AC090142.3-201ENST00000519012 385 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 PRELID3BP2-201ENST00000605362 201 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD114-21-201ENST00000606412 72 ntBASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 U91328.3-201ENST00000608931 354 ntTSL 3 BASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
BLOC1S4Q9NUP1 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 RNA5SP48-201ENST00000363969 126 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD114-24-201ENST00000365029 72 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD38C-201ENST00000384381 69 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 MIR520C-201ENST00000385005 87 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 MIR516B2-201ENST00000385190 85 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 RNU4-30P-201ENST00000410245 143 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 RNU7-90P-201ENST00000459216 62 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.721-201ENST00000517207 102 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 AC136628.3-201ENST00000521868 290 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 AC007485.1-201ENST00000616755 206 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 AC090574.1-201ENST00000623186 233 ntBASIC1.18□□□□□ -2.22
BLOC1S4Q9NUP1 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD50B-201ENST00000364995 70 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 RNU6-969P-201ENST00000383900 105 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 Y_RNA.445-201ENST00000384168 102 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 MTND4P19-201ENST00000446659 478 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 AC117454.1-201ENST00000491120 168 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 AC005840.1-201ENST00000498412 377 ntBASIC1.17□□□□□ -2.22
BLOC1S4Q9NUP1 U8.7-201ENST00000364940 136 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 SNORD42.2-201ENST00000365570 69 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 RNU6-442P-201ENST00000383968 104 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 RNU6ATAC19P-201ENST00000408096 110 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 RNU6-321P-201ENST00000410912 106 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 AC092473.1-201ENST00000441098 221 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 RNU7-21P-201ENST00000459430 62 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 AC136932.1-201ENST00000574771 208 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 AC124312.5-201ENST00000604451 268 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC1.16□□□□□ -2.22
BLOC1S4Q9NUP1 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 Y_RNA.183-201ENST00000363882 113 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 RPS29P28-201ENST00000446439 141 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 MTND4LP30-201ENST00000454092 297 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 RNU6-437P-201ENST00000459408 95 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 SNORA18.7-201ENST00000516910 131 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 MIR4295-201ENST00000585286 85 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 AC104695.3-201ENST00000604052 296 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 MIR376A1-201ENST00000616574 68 ntBASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
BLOC1S4Q9NUP1 MIR369-201ENST00000362155 70 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 RNA5SP264-201ENST00000363115 107 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 RNU6-674P-201ENST00000363831 107 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 MIR4764-201ENST00000580680 88 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 MIR3145-201ENST00000580727 82 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 MIR3192-201ENST00000584920 77 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 PART1_1.1-201ENST00000611761 217 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 AC008163.1-202ENST00000636004 2889 ntBASIC1.14□□□□□ -2.23
BLOC1S4Q9NUP1 RNU4-38P-201ENST00000364472 129 ntBASIC1.13□□□□□ -2.23
BLOC1S4Q9NUP1 Y_RNA.460-201ENST00000384255 102 ntBASIC1.13□□□□□ -2.23
Retrieved 100 of 98,524 protein–RNA pairs in 192.1 ms